Gene Cphy_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1230 
Symbol 
ID5744835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1553670 
End bp1554713 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content36% 
IMG OID641292335 
ProductABC transporter related 
Protein accessionYP_001558347 
Protein GI160879379 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGAT TTGAAAATCT TAGCAAGACA TTTTCTTCCG GTGATCGATT GGTTGATGCT 
GTTAAAAATG TTAATTTAAC TATTGAAAAA GGTAAGGTTT ATGGCATCAT TGGTTTTTCC
GGAGCAGGAA AGTCCACCCT AGTAAGGTGT ATCAATTTAT TAGAGAAACC AACGGAAGGG
AAAGTCTACA TCGGCGATGT TGAACTTACT GCATTAAAAT CAAAGGAACT TAGAAAACAG
CGAAGAAAAA TTGGAATGAT CTTTCAACAC TTTAATTTAT TTGCATCCAG AACGGTATTC
CAAAATGTTG CGTACTCTCT AAAGCATCAA GGTTTATCAA AAAAGCAAAT TAAGGATAAA
GTCAATGAGT TATTAAAGCT GGTTGGTCTT GAGGAAAAAG CAAATGAATA TCCATCAAAA
CTTTCTGGTG GGCAAAAGCA GAGAGTGGCA ATAGCAAGGG CGCTAGCAAA TGATCCGGAT
ATCTTACTGA GTGATGAGTC TACCAGTGCG CTAGATCCAC AAACTACAGT TTCAATTCTA
AAACTGCTTA AAGAAGTTAA CCAAAAGCTT GGTATCACAA TCGTCATCAT CACCCATGAG
ATGCAGGTAG TAAAAGAAAT TTGCGATAGA GTTGCAGTAA TGGAGAATGG TGAAGTTGTG
GAAGAAGGGG ATGTATTTGA GATATTTGCA AACCCACAGA AGAAGATAAC AAAGGATTTT
GTTGATAGTA CTTCAAATCT TTCAAGAATC TATAACTACA TAGATGAGAA AGCAAAGATT
ACAGAACTTA AACAAGGGGA GTGTATCTTA CGATTCAAGT ACTTGGAGAG AAGCACATCA
GAGGCTCTCG TATCACAGTT GTCAAGGGAA TTTTCATTGA ACATTAATAT CATTTTTGGA
AACATTGAGC TTATTGGTGA AAATCCAATC GGTGGTTTGG TTTCTATCGT AAGTGGTAAG
AAGGAAGATA TTGATGATGC AATAAAGTAT TTACAAGATA AAAATGTTGG AGTGGAGGTG
ATACTTGATG CAAGAGCTTC TTGA
 
Protein sequence
MIRFENLSKT FSSGDRLVDA VKNVNLTIEK GKVYGIIGFS GAGKSTLVRC INLLEKPTEG 
KVYIGDVELT ALKSKELRKQ RRKIGMIFQH FNLFASRTVF QNVAYSLKHQ GLSKKQIKDK
VNELLKLVGL EEKANEYPSK LSGGQKQRVA IARALANDPD ILLSDESTSA LDPQTTVSIL
KLLKEVNQKL GITIVIITHE MQVVKEICDR VAVMENGEVV EEGDVFEIFA NPQKKITKDF
VDSTSNLSRI YNYIDEKAKI TELKQGECIL RFKYLERSTS EALVSQLSRE FSLNINIIFG
NIELIGENPI GGLVSIVSGK KEDIDDAIKY LQDKNVGVEV ILDARAS