Gene Cphy_1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1224 
Symbol 
ID5743323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1546158 
End bp1547300 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content34% 
IMG OID641292329 
ProductABC-2 type transporter 
Protein accessionYP_001558341 
Protein GI160879373 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTTC ATCAATATAA ATACCGTATC AAATACTTTT TAAAGACTCC AACCATACTT 
TTTTGGGCAT TTTTCTTTCC TCTTATATTG GGGACATTAT TTCGTGCTGC TTTTGGTGAT
GCAATGTTAA ATCTTGGTGT TATGGATAGC ATCCCTGTTG CTGTTGTGAT TGAAAAAGAG
CTACCACAAG AACATGCTCT ATTATCTGTT CTTCCATCAG TTACTTATAA AGATGAAACT
CCAATGTTTC AAGTTACAAA GACAACAAGG GAAGAAGCAG ATCAAATGCT TAGAGAGGGA
ACAGTGAATG GGATCATAGT GCTATCTGAT ACTGTGGAAC TATTTGTATC TGATAGTGAG
CTACAAACCA ATATTTTAAA ACAATTTCTA GATCAATATA GCCGAATGAG CAAAGCAATA
GAGGATATTG CAAGAAACAA TCCGCAATCT CTTCCGAAAG CAATATCACT ATTACAATCC
GATGCCCAAA ATATTGTGAA AGTATCACTG AATGGAAAGA ATACCAACGG CTTTATCCAA
TATTTCTACT CCTTAATTGC AATGGCATGC ATGTTTGGAA GTTATTTAGG TCTAAGCAAT
AGTATGGATA TTCAAGGTAA CCAAAAACCA GTAGCTGCAA GAAGATGCAT TACTCCAACC
AATAAGTTAA TATTAATCCT TGCAGATTCC TCTGCAGCTG TAACCATTCA TTTTCTAGAA
CTGATTGTTG TATGGATCTA TCTTAGATTA GTTCTTGGTA TACCAATTGG GGATCAGCCA
CTTTTCTTTT TGCTTACTGT ATTTATTGGT AGTGTAATTG GTATTGCTTA TGGTCAATTT
GTTGGATCTA TTAGCAAAGG TCATGAAGCA CTACGCTTTT CTATAGTTAC CGGAATTAGC
TTAGTATTTA GTTTCCTCAG TGGTTTAATG GTTGATACAA TAAAACACGT CATAGAAGTG
AATGTTCCGT TATTAAATCG GATCAATCCC GCTTCTTTGA TAACAGATGC TTTTTATAGT
CTAACCGTAT TTAGTGATTA TTCTAGATTT ACAAGTGATA TTGTATCCTT AATAGTCATT
GCAGCAATCT TTATTTTAGC AAGCTTTTTG ATACTCAGGA GGGAACGATA TGATAGTATT
TAA
 
Protein sequence
MFFHQYKYRI KYFLKTPTIL FWAFFFPLIL GTLFRAAFGD AMLNLGVMDS IPVAVVIEKE 
LPQEHALLSV LPSVTYKDET PMFQVTKTTR EEADQMLREG TVNGIIVLSD TVELFVSDSE
LQTNILKQFL DQYSRMSKAI EDIARNNPQS LPKAISLLQS DAQNIVKVSL NGKNTNGFIQ
YFYSLIAMAC MFGSYLGLSN SMDIQGNQKP VAARRCITPT NKLILILADS SAAVTIHFLE
LIVVWIYLRL VLGIPIGDQP LFFLLTVFIG SVIGIAYGQF VGSISKGHEA LRFSIVTGIS
LVFSFLSGLM VDTIKHVIEV NVPLLNRINP ASLITDAFYS LTVFSDYSRF TSDIVSLIVI
AAIFILASFL ILRRERYDSI