Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1209 |
Symbol | |
ID | 5743308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1525949 |
End bp | 1527427 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641292314 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_001558326 |
Protein GI | 160879358 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAA ATTTTAATTA CAAAATAGTA AAAGCTACAA AGTGGTCAAC ATTTACAGAA GTTTTTGTAA AAATACTATC TCCTATTATG AATATGATTC TGGCAAGAAT TCTTACACCG GAAGCATTTG GTGTAGTGGC TTCTATCACT ATGATAACAA GTTTAGCTGA TATATTTTCA GATGCAGGAT TTCAAAGTTT CTTGGTTCAA CATGAATTTA AAAGCGAAGA GGAATTAGAT AATAGTACAA CAGTTGCTTT TTGGTCTAAT TTCATAATCT CATGTTTGAT ATATTTGTTA ATATTTATTA CAAGAAATCA TATTGCTAGA ATGCTAGGAA GTCCGAATTT AGGATTTGCA ATTAGTATAG CCAGTCTAAA TATACTATTA ACCACATTTT CAAGTATCCA AATAGCAAGA TATCGAAGAA ATTTTGATTA TAAAACACTT TTTTACGTTC GAATTGTTAG TTCTGGAGTA CCATTTTTAG TTACGATACC TATGGCTATG ATCTACAAAA ATTATTGGGC TTTATTAATT GGTACTCTAG CATCCAATAT AATTAGTGTA ATCGGGCTTA CGATTCGATC TGATTGGAAG CCTAGATTCT ACTTTAGTAT AAGACATTTT AAAGAAATGT TCTCATTTAG CATGTGGACA TTTTTAGATA TTATAACGAT GTGGTTGGTA TCCTATACAG GAACTTTTAT AGTAGGATAT TATTTAAATG ATTATTATCT TGGATTATAT AAAATCTCAA TTACTACAGT GGATAGTTAT ATGGCTATTA TCACAGGTTC CACTGCAACT GTTTTATTTT CTGCTTTATC ACGGTTAAAA GATGACCAAA AAGAATATGA AAAGACACTT TTTACATTCC AAAGAATGAT ATCCATGTTT GTTATGCCTA TGGGGATTGG ATTATTCCTT TACCGTGGCT TAGCAACTAA AATTCTACTA GGTTCTCAAT GGACAGAAGC AAAGGATTTT ATTGGACTAT GGGCATTAAT TAGTGCAATC AATGTTATAT TTGGACAAAA CATTAGTGAA GTTTTACGAA GTAAGGGGAA ACCCCATTTA GCACTTTTAG CACAATTTTT GCATTTAATT GTTCTTGTTC CCGCGCTAAG TTTTACATCA AAAATAAGTT TTAGAGCACT ATATATAACC CGTTCTTTGG TAAAACTAGA ATATGTTTTT GTAGGCTTGG TTCTTCTTTG GATAGCATTA AGAATATCAT TTCTAAGAAT ACTTAGGAAT GTAGCACCGA CGATTATAGC ATCCTTATTG ATGGGGGGTA TAGCTATCGT ATTGCAAAAG GTAAGCAACG CGGTAATTTG GGAATTTATA TCTATATTTA TATGTATGCT GGTGTACTTT GGAATCATTT TATCCAATCC ATCCATGCGC GGTGATTTAA TAGGTATAAA ACTTGTCAGA AAGATATTAA GTAAGATTAA GTTTTTGAAA ATAGATTAG
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Protein sequence | MSENFNYKIV KATKWSTFTE VFVKILSPIM NMILARILTP EAFGVVASIT MITSLADIFS DAGFQSFLVQ HEFKSEEELD NSTTVAFWSN FIISCLIYLL IFITRNHIAR MLGSPNLGFA ISIASLNILL TTFSSIQIAR YRRNFDYKTL FYVRIVSSGV PFLVTIPMAM IYKNYWALLI GTLASNIISV IGLTIRSDWK PRFYFSIRHF KEMFSFSMWT FLDIITMWLV SYTGTFIVGY YLNDYYLGLY KISITTVDSY MAIITGSTAT VLFSALSRLK DDQKEYEKTL FTFQRMISMF VMPMGIGLFL YRGLATKILL GSQWTEAKDF IGLWALISAI NVIFGQNISE VLRSKGKPHL ALLAQFLHLI VLVPALSFTS KISFRALYIT RSLVKLEYVF VGLVLLWIAL RISFLRILRN VAPTIIASLL MGGIAIVLQK VSNAVIWEFI SIFICMLVYF GIILSNPSMR GDLIGIKLVR KILSKIKFLK ID
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