Gene Cphy_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1202 
Symbol 
ID5743301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1519203 
End bp1519721 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content32% 
IMG OID641292307 
Productoligosaccharide biosynthesis protein Alg14-like protein 
Protein accessionYP_001558319 
Protein GI160879351 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA AATTAGAAAA GGGGAAGAAA AGTATAGAGA TAAATAATGA ATTTAAAGGT 
AAACATAATC GTAATCCCAA AATATGCCTC GTATCTTCCT CAGGAGGACA TTGGGAACAG
CTTAAAAAGT TGCAGCCACT AATAGATAAA TATAGTGGCT TCTTTATTAC TGAGAAAACC
CAGATTGAGG AAAATGCAAA GTATTTCATG AAGCAGACTG ATTTAAAAGA TAAATGGATG
CCATTTAAAA TGCTTTATAA TTCCATTTAT GCCTTGTTTA TTTGGTTAAA AGAACGCCCT
GACTTTATTA TTACTACTGG CACAATGATT GCCTATCCCT TTTACATATT ATCTATTATT
TTCCATAAAA AATTTATCTT TATCGAAACC TTTGGTAGGG CTAATATGCC CACTGAAGCA
GGAAAAAGAA TGGAAAAGCA CACTGACTTA TTTATTGTTC AATGGGAATC CCAGAAAAAA
TTTTACAAAA ATGCAATCTA CGGGGGGTGT TTGTATTGA
 
Protein sequence
MKRKLEKGKK SIEINNEFKG KHNRNPKICL VSSSGGHWEQ LKKLQPLIDK YSGFFITEKT 
QIEENAKYFM KQTDLKDKWM PFKMLYNSIY ALFIWLKERP DFIITTGTMI AYPFYILSII
FHKKFIFIET FGRANMPTEA GKRMEKHTDL FIVQWESQKK FYKNAIYGGC LY