Gene Cphy_1155 details

Gene Information

• Locus tag: Cphy_1155
• ID: 5742878
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 1455562
• End bp: 1461411
• Gene Length: 5850 bp
• Protein Length: 1949 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 641292260
• Product: nucleic acid binding OB-fold tRNA/helicase-type
• Protein accession: YP_001558272
• Protein GI: 160879304

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCCTGAAC TCGATGCGAG CAAAGGATGG CTTGGTGACG GCACCGAAAC ACCAATTGCT 
GTTACGGATA ATAAGGTGGA GAATCCGGAT AGTAAATATG TGTGGGATCT TAATGTTTCA 
GGGGATCAGG TGATTTTGAC GGATTCTAAA GGACAGAAAA TTATGCCAAA AGCTGCGGCT 
ACGAATGGAA TAATGGAAGG TAAATATACA TGGATATTTG TAGAAGAGAG CGTTGGGATC 
TTTACGATTA ACTCAACAGC TGAAGATGCT GTAATTTTAG CAAGCAATAA AACCTTAAAT 
AGTGGAGATA ATAAATTTAG AGCTTATAAA GTTGGGACGG TATCAGGTGC TCCAAGTACT 
TATTTTTCTA AATTTACTCT ATACAAACTA GATGATGGCA TACCATCAGG ACCTGTAAAA 
ACAGCAACAC CGCAAGCAAG TAAGCCGTCT GGCGTAGTTG CCTCTGGAAG TGCTATTACA 
CTCTCCTGTA CAACAACAGA TGCGAGCATT CAGTATCGTG CTACGACTGT TTCTCCTTCT 
GCAATTTGGG TAGATTATAT AGAGCCGATT ATAATTAACA GTGATACAAG AATTGAGGCA 
AAGGCTACAG CACCGGAGTA TTTAGAAAGT GATATTGTAG TATTTAATTA TGTGCTAGCA 
AAAGAACCGG AAGTAGACCC AGGTTTATTT GATCCGATTC CTGTAATTCC CGAAGGTGCA 
ATATCTGTAT TAGAGGCCAG TCAACTAAGC AGCGGTCAAG TTACTGTAGT GGGACAACTT 
GTTTACCGAT ACGGCAACTA TAATGCGGTG AATACTGCGA TTTTAGAAGA TGTCATTAAT 
GGACAGATTT ATGCACTGCA GATATTTAAT GCCCTATCCG ACTACAAAAT CGGAGATGTT 
GTAAAACTAA CCGGAACAAT GGGGGAATAT GGGGGAGTTC CTCAGTTAAG CAACCCTTCA 
AAAATAGAAG TACTCACACC GGCTGCAAAT ACTCAGTTGA TTCCTGCGCA GAAATTCACT 
TCATTTAATG AATTGATGGC GGTTAAGGAT TCCTTGTTAT CGGAATGGGT AGTAATTAAG 
GATGTAACAC TTGGTACATA TAGCAGCAGT GCAAGCACAA AGGTTACGGA TAGCAATGGA 
GTAAGCATGG ATATATACCG TGCAGCAACC TATCCAATCG GAGTAACAGC CGGCGAAAAG 
GTCGATCTGT ATGCATGTGT ATCCAAACAT ACTACGACTG ATCAGCTTCG TGTCGGTTAT 
TCCACTGATT ACGTTATATC AAATGATATG AAAGCTCCGA TAATAACATT ACCTACTTTC 
GAGAAGGCGG AGTTAGGAAA AGATTATAAA ATATCAATAA CAATTACAGA TAATGTAGCA 
GTATCCGATG CAGATTTAAC TTATACAGTA AATCAGGTAC CTACTAAGGT GGCTTTGGCA 
CAGAGCGCTG CTGATAGTAC AAAATGGGAA GTAACCATAC CTGGAAGCAC ATTTACTGCA 
GGCGTTTCTA GCTATACTGT TCTTGTAACT GCCAGAGACA AGGCAGGCAA TGAGGCAACC 
AGCAGCGTAA TAATGATTTC TGTAGTAGAT GAACCTCAGG TTACGAAAGT TACACCTGAA 
CGTAATGGAA AAATAGTGGA TGAAAAGAGA CCGCTTATTA GCATAGCTGC AATAAATCTT 
GGATTGGCTC CAACTGCAAA GCTTACGTTA AAATCAGGAG AGACTGTTAC TTTAAATGCT 
GTTAACATGA GCTATTCTGG CGAAACCTTT TCCTATACTC CGTCCAAGGA TCTAGCAGAT 
GCTCGTTATA CAGCATCCGT AGTGATTACC CGTGCAGATG GAAAAGCTAT AACCTATGAG 
TGGCCATTTA CCGTAGGTAC ACCAAAATAT AGCTTATACT TTGGACAATT ACATAGTCAC 
ACAACTTATT CCGATGGTTC TGGTTCCTTA GATGAAGCAC TTAATTATAT TAATAAAATT 
AGCAAGGGTG ATAATATTGA TTTCGTAGCA TTTACAGATC ACTCTAACTA TTTTGATAAA 
TCAGGTGCGG CTAACCCAGA AGCTTCTCTT TATAATAAGA GTTTGATGAC GGCAGAAAGT 
CAAAAAATAT GGAATGAATA TAAGAATAAA ATTGCTGATT TTAATGCATC TTCAACAAAC 
AGAGGAGTGA TTGCCCTCGG TGGTTTTGAA ATGACTTGGT CAGGCGGACC GGGACATATG 
AACACCTGGA ACACAGAAGG TATTGTCAGC CGTAATAACA CAATCTTGAA CAACAAAACA 
AATGATGCCG GAATGAAAGC TTATTATACT TTATTAAGCC AACCAGAAGG TGCTAATTCT 
GTCAGTCAGT TTAATCACCC AGGCAAAACA TTTGGTACCT TTAGCGATTT TGCTTATTGG 
GATCCTACCA TTGATTCCCG TATTACTTTA CTTGAAGTTG GTAATGGAGA AGGCGCAATC 
GGCAGCGGCG GGTATTTCCC ATCTTATAAT TATTACACCA TGGCATTGGA TAAAGGATGG 
CATGTTGCGC CAACTAATAA TCAGGATAAT CATAAGGGTA AATGGGGAAA TGGAAACGAT 
GCCCGTGATG TTATCATTAC CGACAACTTT ACGGAACAAG GTATTTATGA TGCATTAAAG 
GCGCGTAAAG TATATGCAAC GGAAGATAAG AATTTAGAGA TTACCTATAC TGTAAATGAT 
GAATTAATGG GAAGTATCAT AAAGGAAGTA CCTAAAAGTC TTGATTTAAA GGTAACATTA 
AGTGATGCGG ACGATATAAT TCAAAAAGCA GAGGTAATTG CAAACAGTGG ACGTATTGTC 
CATACCTGGG ATGTAAATGC TCAGAGCAAA GAACTTAGCG TAACACTTAG TCCAGAATAT 
AGCTACTATT ATATCAGAGT AACAGAAAAG GATGGAGACC TTGCAGTAAC GGCACCGGTA 
TGGATTGGTA ATGCAAAGGT GTTTGGTATC TCCAATGTAG AAAGTGACAC AATAATACCG 
GTTACCGATG AACCAATGAC GGTAAAAACT ACTTTATTCA ACAGTGAATC AACAGATATT 
ACTATTAAGT CTATGGCTTA TAGTTTAGAT GGAAAAATTA TTGATTTAAA AACGAGTGTA 
GGTACTGTTG CAAAAGGAAC GACTCAGGTA ATTAACTATT CGTTTAAACC TACCAAAGCA 
AAGGTACAGA CCCTAAATGT TGAAGTTGTT ATGACCTTAG ATGGCATTGA CTACAGCTTT 
ACAAAGGACC TTAGCTTAGA TGTGAGAGAT GCTAATAAGC TGGTATACAT AGGAATTGAC 
GGAAGTCATT TTAATGAATA TGTGGCTGGT AATTACAAAG ATTCTATGGG CAACTTTGGA 
AAACTCGCTG CAGAAAGTAA TGTAAGATGT GTGGTTCTTA ACACCAGTGA ACAATTATTA 
GAGGCAGCTA AAAATGAGAA TGGTAAGTAT AAGATGCTTA TATTAACAGC ACCAAGCCGT 
CGTGATGGTA CTAAATTAAG AAATCCATAT CTCAATTACT CAGCTGGGGA GATAGCAGCA 
ATTAAAGGTT TCTCAGAAGC AGGGGGAAGT TTAGTACTTT GTGGCTGGTC AGACTTATAC 
GAGAATTATG GAGCTTTTCC GGCAGAGGAC CATATGGCAG CACAGCAGAA TAAATTATTA 
GAAGCAGTTG GAGCTTCTCT ACGCATTAGT GATGATGGAG CTTATGATGA TGTATTAAAT 
GCTGGTGGAA GTGAAGCCAA TAAAGCAAGA TTATATTTAT CCACCTATAA TTGGGAGAAT 
CCATTTACAC AAGGTATTGA ATTCGATAAA GATAATCCAA ATGATAATAT GCATTCACAA 
CTCTTTAGTC AATATGGTGG CGGTACAATT CATGTGGTAG ATAAGAATGG AAATGCTACC 
TCTACACTAC CAGAGAATAT TTCTCCAATT GTATGGGGAC ATAGTACTAC CTATTCAAAG 
GATTGCGATA ATGATCATCT TGGTGGAAGC GCTATACCAA AATATGAATA TGCACAAGGT 
GATAATCGTC TGATGGTACT TGCAAGTGAG ACTGTGACAC ATGCAAATGG AACTCAATCA 
CTAGTGATTG TAGATGGTGC AGCATTTATG AGTAATTTTG AAATCCAAGC TACATTAGAT 
AATACTGTAG AAAAAAATTA TTCAAATTAT ACAATTTTAC AAAACTTAAT CCAGTATGCA 
AATCCGACAC AGATTGATAA GATTGCAGAT GTACAAAAAG AAGCAGAAGA AGGTGTTAAA 
TTTTCAGTAG AAGGTATCGT AACTTCCAAT GCTTCTGGAT ATGATAAGCC TACTGCATTT 
TTTGACTGTA TCTATCTACA GGACGAAACA GCTGGTATTA ATGCATTCCC AGTGGCAGGA 
GACTTTAAAG TTGGTCAGAA GGTTCGAATT ACGGGAACAT CTTCTTCTTA TCAGGGAGAA 
AGACAGTTAA ATGTTAGCAG TATATCCCTG GTAGATAGTA ATATTACAAA AATAGAACCT 
AAAGAAGTAA CTGCAAAGCA GATTAATGAT AGAACATACC TTGGAAGCCT TGTAAAGATT 
TCAGGAAAGG TAACAAAGGT TGAACTTGAA AACGGAGCTG TCCAGACGAT TCTTGTTCAG 
GATAACGCTG GAAACACTGC TCGTATCTTT ATTGATGGCT ATATTACAAC CGACAAGGAA 
ATTATAGATT TAGTTGTTGG AAGCTTGATT ACTGCTGTTG GTCTGTCCTC TTATGATAAT 
ACCTTTGATG GTCTTGCAGC GCGTATTCGT ATTAGAGATC GTGGGGATAT TGTATGTAAG 
CGTGATGATA CACCAACACC AACATCAACA CCAACACCAA CGCCTACGAC AACACCAACG 
CCAACACCGA AACCTGAGGG TCAAACTGTA ATAACAGTTG ATAAAGCAGA AGTTACCATC 
GTGGGTGGAA AAGCAAATGT AAAAATAATA ATCAGTGAAG AAGTCCTGAA AGATGTGGTG 
AAAAATGGTA ATAAAAACAT TACAATTTCA TTAGGGAAAG AAGTATTAAA GGATATTATA 
TCGAATAGCC AGGTTAAAAA GGGTATAGTA ATCGACTTGT CCATTCCTTC TGTTAAAGAT 
GCAAATGTGA ATAACATTGT ATTAAGTAAA GATACATTGT TATTAGCAAA GAAATCCGGA 
CAGAAGCTTA CTATCAATGT AGCATTTGGA AAGGGTTACA CAGTTGATAT TCCTGTATCT 
GAACTGAAGA AAGTTGCATT TGTTTCAAAA GATCTGAATA TAGCAGTTAC CTTGAAGAAA 
GATACGAAAG CAGCTGCAAA ATCAGTAGGA ATCCTTTCCG TAGGAACGGA AGGTAAGTTA 
ACAACAGGTA TGGTAGTTAC AGTGCCTGTG AAAGGTACAC TTTCCTTATC AGCAGATAAA 
AAGGTATATA TTTACCATAA AAATGCTAAG ACCGGTGCAT TGGAAGAAAT GCCAAACAAT 
CCAAGAACCG TAGCAGCGGA TGGTACCATA AAACTTTCTA CCCTAAGCGG AGGAGATTTT 
GTTATTTGCA CAGCGAAGGT AAAGGATGCA GTAACATTAG TAGACAGGGT GAAAGTAACC 
GTTGAATCTA CCGTTGCTAA AGGTGAAAAA ATCAATGTAA AGGTAGCTCT TCCACAGGAA 
TTAGCGCGAG TTACTGCATT TACAAAAGGT GATCCGGTTG GTCAGGAAGA AGTAAAGGTA 
ACATATAAAG TAAGCGATAA GAATATTGCA ACTGTATCCA GTAATGGAAC TATTACTGCT 
AAGAAGAAAG GAACCATTAA GTTAACAGTT GTAATTACCT TAGAGAATGG AGAAAAGAAG 
AACTTTAACA AAACTATCAA AGTAAACTAG 

 

Protein sequence

MPELDASKGW LGDGTETPIA VTDNKVENPD SKYVWDLNVS GDQVILTDSK GQKIMPKAAA 
TNGIMEGKYT WIFVEESVGI FTINSTAEDA VILASNKTLN SGDNKFRAYK VGTVSGAPST 
YFSKFTLYKL DDGIPSGPVK TATPQASKPS GVVASGSAIT LSCTTTDASI QYRATTVSPS 
AIWVDYIEPI IINSDTRIEA KATAPEYLES DIVVFNYVLA KEPEVDPGLF DPIPVIPEGA 
ISVLEASQLS SGQVTVVGQL VYRYGNYNAV NTAILEDVIN GQIYALQIFN ALSDYKIGDV 
VKLTGTMGEY GGVPQLSNPS KIEVLTPAAN TQLIPAQKFT SFNELMAVKD SLLSEWVVIK 
DVTLGTYSSS ASTKVTDSNG VSMDIYRAAT YPIGVTAGEK VDLYACVSKH TTTDQLRVGY 
STDYVISNDM KAPIITLPTF EKAELGKDYK ISITITDNVA VSDADLTYTV NQVPTKVALA 
QSAADSTKWE VTIPGSTFTA GVSSYTVLVT ARDKAGNEAT SSVIMISVVD EPQVTKVTPE 
RNGKIVDEKR PLISIAAINL GLAPTAKLTL KSGETVTLNA VNMSYSGETF SYTPSKDLAD 
ARYTASVVIT RADGKAITYE WPFTVGTPKY SLYFGQLHSH TTYSDGSGSL DEALNYINKI 
SKGDNIDFVA FTDHSNYFDK SGAANPEASL YNKSLMTAES QKIWNEYKNK IADFNASSTN 
RGVIALGGFE MTWSGGPGHM NTWNTEGIVS RNNTILNNKT NDAGMKAYYT LLSQPEGANS 
VSQFNHPGKT FGTFSDFAYW DPTIDSRITL LEVGNGEGAI GSGGYFPSYN YYTMALDKGW 
HVAPTNNQDN HKGKWGNGND ARDVIITDNF TEQGIYDALK ARKVYATEDK NLEITYTVND 
ELMGSIIKEV PKSLDLKVTL SDADDIIQKA EVIANSGRIV HTWDVNAQSK ELSVTLSPEY 
SYYYIRVTEK DGDLAVTAPV WIGNAKVFGI SNVESDTIIP VTDEPMTVKT TLFNSESTDI 
TIKSMAYSLD GKIIDLKTSV GTVAKGTTQV INYSFKPTKA KVQTLNVEVV MTLDGIDYSF 
TKDLSLDVRD ANKLVYIGID GSHFNEYVAG NYKDSMGNFG KLAAESNVRC VVLNTSEQLL 
EAAKNENGKY KMLILTAPSR RDGTKLRNPY LNYSAGEIAA IKGFSEAGGS LVLCGWSDLY 
ENYGAFPAED HMAAQQNKLL EAVGASLRIS DDGAYDDVLN AGGSEANKAR LYLSTYNWEN 
PFTQGIEFDK DNPNDNMHSQ LFSQYGGGTI HVVDKNGNAT STLPENISPI VWGHSTTYSK 
DCDNDHLGGS AIPKYEYAQG DNRLMVLASE TVTHANGTQS LVIVDGAAFM SNFEIQATLD 
NTVEKNYSNY TILQNLIQYA NPTQIDKIAD VQKEAEEGVK FSVEGIVTSN ASGYDKPTAF 
FDCIYLQDET AGINAFPVAG DFKVGQKVRI TGTSSSYQGE RQLNVSSISL VDSNITKIEP 
KEVTAKQIND RTYLGSLVKI SGKVTKVELE NGAVQTILVQ DNAGNTARIF IDGYITTDKE 
IIDLVVGSLI TAVGLSSYDN TFDGLAARIR IRDRGDIVCK RDDTPTPTST PTPTPTTTPT 
PTPKPEGQTV ITVDKAEVTI VGGKANVKII ISEEVLKDVV KNGNKNITIS LGKEVLKDII 
SNSQVKKGIV IDLSIPSVKD ANVNNIVLSK DTLLLAKKSG QKLTINVAFG KGYTVDIPVS 
ELKKVAFVSK DLNIAVTLKK DTKAAAKSVG ILSVGTEGKL TTGMVVTVPV KGTLSLSADK 
KVYIYHKNAK TGALEEMPNN PRTVAADGTI KLSTLSGGDF VICTAKVKDA VTLVDRVKVT 
VESTVAKGEK INVKVALPQE LARVTAFTKG DPVGQEEVKV TYKVSDKNIA TVSSNGTITA 
KKKGTIKLTV VITLENGEKK NFNKTIKVN