| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1154 |
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| Symbol | |
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| ID | 5742877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1453274 |
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| End bp | 1455127 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641292259 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001558271 |
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| Protein GI | 160879303 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATAAAG AACAAATTTT AAAAAAGTAC TATGGTTATG ACTCCTTTCG AGATGGACAG
GAGGAGTTGA TAAACAGTAT TTTAGCAGGC AAGGATACGT TTGGTATTAT GCCAACGGGA
GCAGGAAAAT CAGTGTGTTT TCAAGTCCCT GCGCTAATGC TTTCTGGAAT AACACTAGTA
GTATCACCAT TAATTTCTTT AATGAAGGAT CAAGTAGGTA CCTTGAATCA AATGGGAGTC
CATGCGGCAT ACTTAAACAG CTCTTTAACT GCAAATCAAT ATCGACTAGC GTTATCCTAT
GCGAAAGAAG GACGATATAA AATTATCTAT GTAGCACCTG AGAGATTATT AACAGAGGAA
TTTCTTGAAT TTGTGAGGGA TGTTGAGATT TCAATGTTAA GTATTGATGA GGTACATTGT
GTATCCCAAT GGGGACAAGA TTTTCGTCCA AGTTATTTAA AAATCATTGA TTTCGTAAAT
CAGTTACCAG TACGTCCAAT CGTTAGTGCA TTTACCGCTA CTGCTACGAA AGAAGTGAAA
GAGGATGTAA TCCGATTACT TGGATTACAG CGTGCTACGG TAGTTACGAC TGGATTTGAC
CGTAAGAATT TATATTTTGC AGTAAAAAGT CCTAAAGATA AATATGCTGA GCTTGTTTCC
TATCTGAAGG AACATCAGAA TATGAGTGGT GTCATTTATT GTGCTACGAG AAAAGCCGTG
GAGGAAGTAG CGCAGCGTTT AGAAATTGAA GGATATCCGG TAACTAGATA CCATGCGGGA
TTAAGTGATG TCGAAAGGCA TCAAAATCAG GATGATTTTA TCTATGATGT GAAACCAATT
ATGGTGGCAA CAAATGCATT TGGAATGGGA ATAGATAAGT CGAATGTAAG GTTTGTCATT
CATTATAACA TGCCAAAAAA CATAGAAAGC TATTATCAAG AGGCTGGACG CGCGGGAAGA
GATGGGGGGC GTGCAGAATG TATTCTGTTA TATGGTGGAC AAGATGTGAT TACGAATCAG
TTATTTATAG AAAATAATCG CGAGAATGAA GAATTAACTG GTGAATTGTT AGAGGCAGTA
AAGATAAGAG ATCGGGAACG CTTAAAGAAA ATGACATTTT ATTGCTTTAC GAATGACTGT
CTTCGTCATT ATATTTTAGA GTATTTTGGT GAGAAAGCAG AGCCAACTTG TGACGATTGT
TCCAATTGCT TATCGGAATT TGAAATTATT GATATAACCG AAATCAGTAT AAAATTAATT
CAGTGTGTAT TAGAAACGAG GCAACGGTTC GGGTTAATGA CGATTGTTGA TACCGTACAT
GGCAGTAAGT CTGCGAAAAT AAAGCAGTTT CGTCTTGACG AATATGCATG CCATAATTCA
TTATCAGATA TAACGATACC AAGATTACGG CAGATTATGA ATCATCTTGT ACTAAGTGGT
TATTTATTGC TAACAAATTC GGAATATTCC ATCTTGAAAG TAACAGATAA AGCAAAAGAA
TTATTAGAAC ATAGAGATGC GATTGAACTA AAGGTTTCTA AGGAACGAGA AAGGAAGGCG
AAAAGCACCG AAACACGAAG TAAGAAAAAA GCTGTGTATT CATTGGATAC GAATGATGAA
CTATTTGAAG AACTTCGTGT CTTACGTCTA TCAATCGCTA GAAAAGAAAA AGTTCCACCT
TATATAATAT TTGGAGATAA GACATTACTC CAGATGAGTC AGTCTTTACC AACTAGTAAA
GAAGAAATGC TTGAAATTAC TGGGGTTGGT GAAGTAAAGT ATGAAAAATA TGGTGCTCAA
TTTGAAGATG AGATCCGTAG GTTTCAAAGT AATAAGAAGA TAATAAATAG TTAA
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| Protein sequence | MNKEQILKKY YGYDSFRDGQ EELINSILAG KDTFGIMPTG AGKSVCFQVP ALMLSGITLV
VSPLISLMKD QVGTLNQMGV HAAYLNSSLT ANQYRLALSY AKEGRYKIIY VAPERLLTEE
FLEFVRDVEI SMLSIDEVHC VSQWGQDFRP SYLKIIDFVN QLPVRPIVSA FTATATKEVK
EDVIRLLGLQ RATVVTTGFD RKNLYFAVKS PKDKYAELVS YLKEHQNMSG VIYCATRKAV
EEVAQRLEIE GYPVTRYHAG LSDVERHQNQ DDFIYDVKPI MVATNAFGMG IDKSNVRFVI
HYNMPKNIES YYQEAGRAGR DGGRAECILL YGGQDVITNQ LFIENNRENE ELTGELLEAV
KIRDRERLKK MTFYCFTNDC LRHYILEYFG EKAEPTCDDC SNCLSEFEII DITEISIKLI
QCVLETRQRF GLMTIVDTVH GSKSAKIKQF RLDEYACHNS LSDITIPRLR QIMNHLVLSG
YLLLTNSEYS ILKVTDKAKE LLEHRDAIEL KVSKERERKA KSTETRSKKK AVYSLDTNDE
LFEELRVLRL SIARKEKVPP YIIFGDKTLL QMSQSLPTSK EEMLEITGVG EVKYEKYGAQ
FEDEIRRFQS NKKIINS
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