| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1148 |
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| Symbol | |
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| ID | 5742871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1447986 |
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| End bp | 1448957 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641292253 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001558265 |
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| Protein GI | 160879297 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00767065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAG AATTGATTCA GATTCTTTCT CAGATTACGG AAGAGGAAAA ACGTATTTTA
AACGTAAAAA AGGAAGTAGA AAAAGAACGA TACACCTCGA GCAAGGATTT TGTGATTCAG
AAAAATAAGA TGTTAGAAGA AGAACAACTA ATTACAATTC GTCCGCATAC TCGCTTTATC
GATTTCCCCA AACATAAACA TGATTATATT GAAGTAGTTT ATGTCTGTAA GGGATCTTTA
ACCCACACTA TAAACAATGT TCCAGTAGTA CTTGAGGAAG GGGACATATT ATTTCTTAAT
CAACATATTT ACCATGCAAT TAAGGAGGCT GGGAAAGAGG ATATCGCAAT TAATTTAATC
ATCTTACCAC ATTTTTTTGA TGTGAGTTTT TCGATGATTC AAAAAGACAA TGTATTAGCG
GACTTTTTAG TAGGTATCTT AAGAAATGCT TCTCATAAAG AGCAATATCT ACATTTTAAA
GTTAAGGGAA TTCTTGAAAT AGAAAATTTA CTAGAAAATC TTGTGTATTC CTTGGTTCAT
GATGCCTCCA ATAACGACAT GATTAATCAA CGTGTGATGG GACTTTTATT TTTGTATTTG
GTTAAATACT CGGATTCATT AAAAGCTGGA TCTCCCAATA GTTATGAAGA TGTTATTGCT
AAGGCAGCTG TCAATTATAT TGATATAAAT TATAAGACAG CAAGCTTAAC AGAATTAGCA
GAGAAGCTAT GCTTATCGCT ATCATCCTTA AGTAGATTAA TAGCAAGTAA AACGGGGAAA
TCATTCAGAG AGTTATTGCA GGAGAAACGA TTTGAAGTTG CCATATCACT TCTAGCAGAG
ACGAATCTGT CAATTACTGA TATTGTAGTA GCAGTAGGAT ACGAGAATAA CAGCTTCTTT
CATCGTAAAT TTAGGGAACG ATATCATATG TCACCAAAGG AATACCGAGA AAAAAATAGG
AGGATTAGAT AA
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| Protein sequence | MNQELIQILS QITEEEKRIL NVKKEVEKER YTSSKDFVIQ KNKMLEEEQL ITIRPHTRFI
DFPKHKHDYI EVVYVCKGSL THTINNVPVV LEEGDILFLN QHIYHAIKEA GKEDIAINLI
ILPHFFDVSF SMIQKDNVLA DFLVGILRNA SHKEQYLHFK VKGILEIENL LENLVYSLVH
DASNNDMINQ RVMGLLFLYL VKYSDSLKAG SPNSYEDVIA KAAVNYIDIN YKTASLTELA
EKLCLSLSSL SRLIASKTGK SFRELLQEKR FEVAISLLAE TNLSITDIVV AVGYENNSFF
HRKFRERYHM SPKEYREKNR RIR
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