| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1134 |
|---|
| Symbol | |
|---|
| ID | 5741969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 1427155 |
|---|
| End bp | 1428675 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641292239 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001558251 |
|---|
| Protein GI | 160879283 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000497905 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG AACTTTTTCG TATGGAGGGT ATCAGCAAAT CATTCCCCGG TGTAAAAGCA
TTAGATAATG TATCATTATC TGTTAACAAG GGCGAGGTTC ACGGCCTAGT TGGAGAAAAT
GGTGCTGGAA AATCCACTTT AATGAAAATT ATGACCGGCG TTTATCAAGC TGATAAGGGT
GATATTTATA TTGAAAATGA AAAAGTAGTG ATTGATTCTG TTGCAAAAGC ACACGAATAT
GGAATCAGCA TTATTTTTCA AGAATTAACA CTTTGCCGAC ATTTAACAGT TGCAGATAAT
ATCTTTATTG GGCGTCCCCC AGTAAAGGGA GTATTTATCA GTGACAAACA GATGCATCGC
GAAGCTAAAA AGATTCTTGA TAATCTTGGC ATTAATATTA ATACGCATAC AATGGTATCC
ACTTTAAGTG TTGCTCAGCA ACAAATGGTG GAAATAGCAA AAGCTATTTC TTATAATTCA
AGAATTTTAG TATTGGATGA GCCTACTGCA ACACTAACAG AGCGTGAAAT CGAGCAATTA
TTTGTAATTA TTCGTAATCT GCAAAAAAAA GGTGTTGGAA TGGTATATAT TTCTCATCGT
ATGGATGAAC TTAAGCAAAT ATGTGAACGC GCTACAGTTA TTCGAGATGG ACAATATATC
GGAACAAGAA GCTTAAGTGA CATTACTTTA GATGAATTGG TTAATATGAT TGTTGGACGT
TCCCTTGAAG ATAAATTTCC AAAATACGAA CGTAAAATTG GAGATGTCGC TCTTGAGGTA
CGCAATCTTC ATCGTGGAAA TAAAGTGAAT GTTGACCATT TAAAAGTTCA CAAAGGTGAA
ATTCTTGGAA TATCCGGACT TGTAGGAGCT GGTAGAACCG AAATCATGAG ATGTATCTTC
GGAGCTGATA AAGCTGATTC TATGGAATTA ACCATGGATG GTGTACCGGT TACTATTAAT
TCTGTAGCTC AGGCCATTAA ACATGGACTT GCTTATGCAA CAGAAGACCG TAAGTACGAT
GGTTTGGCTC TTGACCTTGA CATAGAGTAC AATACCAACA TGGCACATCT TCATGAACTT
TCAAGATTTG GGTTCATAAA CGATAAAGAA GGTGCCAAAA ACGCTGAAAA ATACAGAAGA
CTTATGAACA CTAAAACACC TACCTTAAGA AAACCTGCCG GTCAGCTTTC TGGCGGTAAT
CAGCAAAAAA TTGTTTTATC CAAGTGGATG TGCAATGATA TTAAAGTTCT AATCGTGGAT
GAACCAACAC GTGGAATTGA CGTAGGTGCT AAATTTGAAA TTTATCAAAT TTTCAACAAA
CTAAGTGATT CTGGTGTTGC AATTATTATG ATTTCTTCTG AACTTCCAGA AGTTCTTGGA
ATGAGTGATC GTGTTCTGGT AATTCACGAG GGAAGTATCA ATGGTGAATT GGATGCTAAA
AAGACCTCTC AGGAAGAGAT CCTCTATCTT GCCGCAGGTT ATAACAAGCT GGAAGGAAAA
CCAGCCCCTA CAATTTCTTA A
|
|---|
| Protein sequence | MSEELFRMEG ISKSFPGVKA LDNVSLSVNK GEVHGLVGEN GAGKSTLMKI MTGVYQADKG
DIYIENEKVV IDSVAKAHEY GISIIFQELT LCRHLTVADN IFIGRPPVKG VFISDKQMHR
EAKKILDNLG ININTHTMVS TLSVAQQQMV EIAKAISYNS RILVLDEPTA TLTEREIEQL
FVIIRNLQKK GVGMVYISHR MDELKQICER ATVIRDGQYI GTRSLSDITL DELVNMIVGR
SLEDKFPKYE RKIGDVALEV RNLHRGNKVN VDHLKVHKGE ILGISGLVGA GRTEIMRCIF
GADKADSMEL TMDGVPVTIN SVAQAIKHGL AYATEDRKYD GLALDLDIEY NTNMAHLHEL
SRFGFINDKE GAKNAEKYRR LMNTKTPTLR KPAGQLSGGN QQKIVLSKWM CNDIKVLIVD
EPTRGIDVGA KFEIYQIFNK LSDSGVAIIM ISSELPEVLG MSDRVLVIHE GSINGELDAK
KTSQEEILYL AAGYNKLEGK PAPTIS
|
|---|
| |