Gene Cphy_1099 details

Gene Information

• Locus tag: Cphy_1099
• ID: 5741934
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 1388945
• End bp: 1389466
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 641292204
• Product: G:T/U mismatch-specific DNA glycosylase
• Protein accession: YP_001558216
• Protein GI: 160879248
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3663] G:T/U mismatch-specific DNA glycosylase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.792997
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTGATT ATCAACATGT TTCACATACC TTCGAACCGG TTTTTGATAA AAATAGTAAA 
ATCTTGATAT TAGGAAGTTT TCCTTCTGTT AAGTCAAGGG AGCAAGAGTT TTATTATGGA 
CATCCGATGA ATCGGTTTTG GAGGATGTTA TCTTCGGTCT TAAAGAAAGA AATACCATCG 
GATAGTTTGA GAAAAAGAGA ATTTCTATTA GAGAATCACA TTGCATTATG GGACGTCATA 
GACAGTTGCG ATATCATCGG ATCAAGTGAT AGCAGTATAA AAAATGTAGT ACCAACCGAT 
TTATCTAGGA TCTTAGCGAT AAGCCCAATA AGTCATATTT ACGTGAATGG AAAAACAGCG 
AAAAAACTTT ATGATCGATA TAGTGAATCA GTAACTGGAT TAAAAGCTAT ATGTCTTCCT 
TCTACCAGCC CAGCAAATGC AATGTTTTCG TTAGAAAAAT TAATAGAAGA ATGGAAAGTT 
ATTATAGAAC CATTGGGAGA TAATTATAGG GATTGTTTTT GA 

 

Protein sequence

MGDYQHVSHT FEPVFDKNSK ILILGSFPSV KSREQEFYYG HPMNRFWRML SSVLKKEIPS 
DSLRKREFLL ENHIALWDVI DSCDIIGSSD SSIKNVVPTD LSRILAISPI SHIYVNGKTA 
KKLYDRYSES VTGLKAICLP STSPANAMFS LEKLIEEWKV IIEPLGDNYR DCF