Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1098 |
Symbol | |
ID | 5741933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1387170 |
End bp | 1388618 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641292203 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001558215 |
Protein GI | 160879247 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.487922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTATCTA TATGGGAAGA AAATTATTCG ATTACTCCAA GAGAGGAATT ATCTGGTGAC TTATCGACGG ACGTAGCAGT GATAGGTGCA GGAATGGCAG GAATATTAAC TGCCTATTAT CTCACACAAA AAGGATTTAA AACGATAGTA GTAGATGGAA AACGCATTGG AAGTGGGCAG ACTAAGGGAA CAACTGCAAA GATTACTTCG CAGCATGCGG ATATTTATCA TAAACTCATC GATCAATTTG GTGAAGAGAA AGCAAAGCAA TATGCTTTTG CAAATGAGAA TGCAATATTA GAATATAAGA ATTTAGTTAA CGAGCTACTA ATCGATTGTG ACTTTGAAGA AAAAAGTGCT TATCTATATA CTTTGGAAGA TGCAACTCCT TTAGAGGAGG AAGCGGTAGC TGCTAGGAAT CTAGGAATTG ATGCTGAATT TACCAAAGAA ACAGAACTAC CTTTTGAGGT AAAAGGCGCG GTAAAATTTG CAAATCAAGC GCAGTTTCAT CCATTAAAAT TCTTGTCTGC AGTGGCAAGT ACATTAACCA TTTATGAAAA TACACAGGTA CTTGAAGTAG AAGATACGTT ACTTAAAACT AATCGCGGCG ATATATCAGC AAAATACATT GTATTTGCAA GCCATTATCC GTTTATCAAT GCTCCAGGAT TTTATTTTCT ACGAATGCAT CAAGATCGAT CTTATTTTCT TGCATGTAAA AATGCGACTA CTTTAATTGG AATGTATCGA AGTTTAGAAA AGACCGGATA TTCACTACGA TGTTATAAAG ATATCTTATT ATTTGGTGGT GGAGGCCATC GAACCGGTGA GAATTCTCGT GGTGGGCAAT ATAGTGCTTT GAGAAGTGCG TTAGCACAAT TTTATCCAGA AAGCAAAGAG TTTGCTCACT GGTCTGCACA GGATTGTATG ACCTTAGATG GTGTACCATA TATTGGTCCA TTTTCAGATG GTAAACCGAA CTGGTATGTT GCCACTGGTT TTGGTAAGTG GGGAATGACA AGTTCTATGG TATCAGCACA AATTATCTCA AAGCAAATAG CAGGTGAAGA TGTTTGGTAT GCTCCAGTAT TTTCTCCAGA GAGATTTACC CTAACTAGTG ATTTTAAAGC ATTGTTAGAA GAAACCAAGC ATGCAGTAAA AGGGTTAACA AGAAGGATAT TTCAGTTGCC AAAAGCGACT GAGGAAGAAC TTCCATTGGG TCATGGTGGA ATTATTGAAG TAGATGAAAT TAAATATGGA GTTTATAAAA CTGAAAATGG TGAAATTTAC ATTATAGACC CTAAATGTCC GCATCTTGGT TGCCAGTTAG AATGGAATCC TGATGAATTA AGCTTTGATT GCCCATGTCA TGGATCAAGG TTTACTTTCA CCGGAGAATT ATTAGATAAT CCAGCACAGA CTGATATTGA TGATAAAAAA GAAAGGTGA
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Protein sequence | MVSIWEENYS ITPREELSGD LSTDVAVIGA GMAGILTAYY LTQKGFKTIV VDGKRIGSGQ TKGTTAKITS QHADIYHKLI DQFGEEKAKQ YAFANENAIL EYKNLVNELL IDCDFEEKSA YLYTLEDATP LEEEAVAARN LGIDAEFTKE TELPFEVKGA VKFANQAQFH PLKFLSAVAS TLTIYENTQV LEVEDTLLKT NRGDISAKYI VFASHYPFIN APGFYFLRMH QDRSYFLACK NATTLIGMYR SLEKTGYSLR CYKDILLFGG GGHRTGENSR GGQYSALRSA LAQFYPESKE FAHWSAQDCM TLDGVPYIGP FSDGKPNWYV ATGFGKWGMT SSMVSAQIIS KQIAGEDVWY APVFSPERFT LTSDFKALLE ETKHAVKGLT RRIFQLPKAT EEELPLGHGG IIEVDEIKYG VYKTENGEIY IIDPKCPHLG CQLEWNPDEL SFDCPCHGSR FTFTGELLDN PAQTDIDDKK ER
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