Gene Cphy_1098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1098 
Symbol 
ID5741933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1387170 
End bp1388618 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content37% 
IMG OID641292203 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001558215 
Protein GI160879247 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.487922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATCTA TATGGGAAGA AAATTATTCG ATTACTCCAA GAGAGGAATT ATCTGGTGAC 
TTATCGACGG ACGTAGCAGT GATAGGTGCA GGAATGGCAG GAATATTAAC TGCCTATTAT
CTCACACAAA AAGGATTTAA AACGATAGTA GTAGATGGAA AACGCATTGG AAGTGGGCAG
ACTAAGGGAA CAACTGCAAA GATTACTTCG CAGCATGCGG ATATTTATCA TAAACTCATC
GATCAATTTG GTGAAGAGAA AGCAAAGCAA TATGCTTTTG CAAATGAGAA TGCAATATTA
GAATATAAGA ATTTAGTTAA CGAGCTACTA ATCGATTGTG ACTTTGAAGA AAAAAGTGCT
TATCTATATA CTTTGGAAGA TGCAACTCCT TTAGAGGAGG AAGCGGTAGC TGCTAGGAAT
CTAGGAATTG ATGCTGAATT TACCAAAGAA ACAGAACTAC CTTTTGAGGT AAAAGGCGCG
GTAAAATTTG CAAATCAAGC GCAGTTTCAT CCATTAAAAT TCTTGTCTGC AGTGGCAAGT
ACATTAACCA TTTATGAAAA TACACAGGTA CTTGAAGTAG AAGATACGTT ACTTAAAACT
AATCGCGGCG ATATATCAGC AAAATACATT GTATTTGCAA GCCATTATCC GTTTATCAAT
GCTCCAGGAT TTTATTTTCT ACGAATGCAT CAAGATCGAT CTTATTTTCT TGCATGTAAA
AATGCGACTA CTTTAATTGG AATGTATCGA AGTTTAGAAA AGACCGGATA TTCACTACGA
TGTTATAAAG ATATCTTATT ATTTGGTGGT GGAGGCCATC GAACCGGTGA GAATTCTCGT
GGTGGGCAAT ATAGTGCTTT GAGAAGTGCG TTAGCACAAT TTTATCCAGA AAGCAAAGAG
TTTGCTCACT GGTCTGCACA GGATTGTATG ACCTTAGATG GTGTACCATA TATTGGTCCA
TTTTCAGATG GTAAACCGAA CTGGTATGTT GCCACTGGTT TTGGTAAGTG GGGAATGACA
AGTTCTATGG TATCAGCACA AATTATCTCA AAGCAAATAG CAGGTGAAGA TGTTTGGTAT
GCTCCAGTAT TTTCTCCAGA GAGATTTACC CTAACTAGTG ATTTTAAAGC ATTGTTAGAA
GAAACCAAGC ATGCAGTAAA AGGGTTAACA AGAAGGATAT TTCAGTTGCC AAAAGCGACT
GAGGAAGAAC TTCCATTGGG TCATGGTGGA ATTATTGAAG TAGATGAAAT TAAATATGGA
GTTTATAAAA CTGAAAATGG TGAAATTTAC ATTATAGACC CTAAATGTCC GCATCTTGGT
TGCCAGTTAG AATGGAATCC TGATGAATTA AGCTTTGATT GCCCATGTCA TGGATCAAGG
TTTACTTTCA CCGGAGAATT ATTAGATAAT CCAGCACAGA CTGATATTGA TGATAAAAAA
GAAAGGTGA
 
Protein sequence
MVSIWEENYS ITPREELSGD LSTDVAVIGA GMAGILTAYY LTQKGFKTIV VDGKRIGSGQ 
TKGTTAKITS QHADIYHKLI DQFGEEKAKQ YAFANENAIL EYKNLVNELL IDCDFEEKSA
YLYTLEDATP LEEEAVAARN LGIDAEFTKE TELPFEVKGA VKFANQAQFH PLKFLSAVAS
TLTIYENTQV LEVEDTLLKT NRGDISAKYI VFASHYPFIN APGFYFLRMH QDRSYFLACK
NATTLIGMYR SLEKTGYSLR CYKDILLFGG GGHRTGENSR GGQYSALRSA LAQFYPESKE
FAHWSAQDCM TLDGVPYIGP FSDGKPNWYV ATGFGKWGMT SSMVSAQIIS KQIAGEDVWY
APVFSPERFT LTSDFKALLE ETKHAVKGLT RRIFQLPKAT EEELPLGHGG IIEVDEIKYG
VYKTENGEIY IIDPKCPHLG CQLEWNPDEL SFDCPCHGSR FTFTGELLDN PAQTDIDDKK
ER