| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1075 |
|---|
| Symbol | |
|---|
| ID | 5741910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1360064 |
|---|
| End bp | 1360906 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641292180 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001558192 |
|---|
| Protein GI | 160879224 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.469983 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAT CTATGAAAAA ATATATGGTC ATATTTGCAT TACCCACAAT TATTGCATTT
GCAATCGCAT TTTTCATACC GTTTATTATG GGAATCTATT TATCCTTTAC GAAGTTTACT
ACTGTTACCA ATGCTCAGTG GGTTGGGTTA GAGAATTATA GAAAAGCATT TTCAAATGCT
GATTTTGTGA ATGCATTTTT ATTTACTGGA AAATTCACAA TCGTATCAGT CATAACCATC
AACCTTTTCG CATTTGCACT TGCGTTACTA TTAACGAGAG GAATTCGAGG CACTAATTTG
TTTCGAACTG TTTTTTTTAT GCCAAACTTA ATCGGAGGTA TTGTACTCGG TTATATCTGG
CAGTTAATCA TCAATGGAGT ATTGGCTAAC TTTGGTGTTG ATATCACGTA TGATGCAAAG
TATGGTTTTT GGGGTTTGGT AATCCTGATG AATTGGCAGC TAATTGGGTA TATGATGATA
ATATATATCG CAGGTATTCA AAACATACCA GGGGAACTTA TTGAGGCAGC GAAAATTGAT
GGTGCAAGAC CAAAACAGAT ACTCGGCAAA ATTACAATTC CATTAGTTAT GCCTTCTATC
ACAATTTGTT CCTTTTTAAC ATTAACAAAT TCTTTTAAGC TATATGATCA GAATTTAGCA
TTAACCGCAG GAAAGCCAGG AAGGTCAACC TCAATGCTTG CTCTTGATAT TAGTAATACC
TTTTATAATA GAAATGGCTG GGAGGGCGTT GGACAGGCAA AAGCAGTGTT ATTCTTTCTT
ATGGTCGCAG TAATTGCACT GATTCAGTTA GTCATAACAA GACGTAAGGA GGTAGAGCAC
TGA
|
|---|
| Protein sequence | MQKSMKKYMV IFALPTIIAF AIAFFIPFIM GIYLSFTKFT TVTNAQWVGL ENYRKAFSNA
DFVNAFLFTG KFTIVSVITI NLFAFALALL LTRGIRGTNL FRTVFFMPNL IGGIVLGYIW
QLIINGVLAN FGVDITYDAK YGFWGLVILM NWQLIGYMMI IYIAGIQNIP GELIEAAKID
GARPKQILGK ITIPLVMPSI TICSFLTLTN SFKLYDQNLA LTAGKPGRST SMLALDISNT
FYNRNGWEGV GQAKAVLFFL MVAVIALIQL VITRRKEVEH
|
|---|
| |