Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1052 |
Symbol | |
ID | 5741888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1323957 |
End bp | 1324958 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641292159 |
Product | hypothetical protein |
Protein accession | YP_001558171 |
Protein GI | 160879203 |
COG category | [S] Function unknown |
COG ID | [COG4905] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000029525 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTT TTTATTTGAT TGGAATAACT TCCTTTCTGT CTCTTTGGGC GGTAAAGGGT ATTAGTTTCT ATGATGTTTT AATTAACTTC TTTTTGTATA GTTTTATCGG TTGGATTTAC GAAAGTACTT TAGTCAGTGT ACGTGAGAAG ACCCTTACAA ATCGAGGATT TCTAAATGGT CCAATTATAC CGATATATGG TTGTGCGGCA ACTTTAATTT ATATGGCATT TTATAATGAT TATACGATAT CATTAGCACT TCATATAAAT GCTCTACATA TGATTGAAGT TTTCTTTTTT GGGATGATAA TAGCTTCTAT TCTTGAATAT GTTACTTCTT ATCTTATGGA GAAATTTTTC CATGCGAAAT GGTGGGATTA TAGTAATTAT CCATTGAATA TTAAAGGAAG AATAAGTCTT CCATCTTCAT TATTTTGGGG ATTATTATCT ATCGTTATGG TTTATCTGAT CCAACCTGCC GCAAATAATT TGGTGGAAAG GATTCCAAGA CCACTTGGTG ATTATCTTAT TTTAGCAGCT ATCGCAGTAG GGAGCTGCGA TTTTATTATG ACAGTTGTTG TTACCTTAAA ACTTAGCAAG CAACTTGAAG TTCTAGAACG TTTAAGAGAA GAAGTATTTG AGTATACCAT GGGATTAAAA TGGTATGAAA AAAGAGAGGA ACTTAAGGGG CGTCTTTCTC ATAGCAAGGT AGCAGAGTTT GCAGAGGAAT TAAGAGGCCT CGTTAATAAG AATTACGAGA GGTTTGTGCA AAGAAAAAAT TCTGAGGACA ATATAGAACG CAAAAGTTTG CGCTTTGATA TTGAACAGAA GTTAAAGAAC TTTATGGAAA GCTATAATAA GTCTGTTAAT ACAAAGTTGC AAAGAAGTAT TTATAGTCGT ATCTTTAAGG CTTTCCCTAA TATGAAAATG ATCGGCAAGG AAGGGGTATT TGCGGATTTT AAGGACAAAC TTAAGAATTC TTCGATAAGA AAGAAGAAAT AG
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Protein sequence | MNFFYLIGIT SFLSLWAVKG ISFYDVLINF FLYSFIGWIY ESTLVSVREK TLTNRGFLNG PIIPIYGCAA TLIYMAFYND YTISLALHIN ALHMIEVFFF GMIIASILEY VTSYLMEKFF HAKWWDYSNY PLNIKGRISL PSSLFWGLLS IVMVYLIQPA ANNLVERIPR PLGDYLILAA IAVGSCDFIM TVVVTLKLSK QLEVLERLRE EVFEYTMGLK WYEKREELKG RLSHSKVAEF AEELRGLVNK NYERFVQRKN SEDNIERKSL RFDIEQKLKN FMESYNKSVN TKLQRSIYSR IFKAFPNMKM IGKEGVFADF KDKLKNSSIR KKK
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