| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1051 |
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| Symbol | |
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| ID | 5741887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 1322411 |
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| End bp | 1323727 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641292158 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001558170 |
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| Protein GI | 160879202 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00213873 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAACAG AGGAAGGAAA AGAAGAATTA TATCTATATT CACTAAAGAA GATGGCAGAA
CATAATGCCG CTACATCACG TTATAACCTA ACCGGCTTAT ATGGAAATAA TGCCTTTTTA
TATAAAGGAA ATGAATGCCT AAGAACACAT AAAGATAAAA AATATGCATT GATACGTATG
GATTTATATC GTTTTAAGAC TGTAAATGAA TTTTGTGGGC GAAGTAAAGG CGATGCTCTT
TTAATACATA TTGCAGATTG TTTCCGCGTT TATGAGACTG AATTGTCTAT AGTCGGCCAT
CTACGTGCTG ATATTTTTGC TTTATGTACC CCTTATCAAG AAATAGAAGA CCTAATTAAA
ATAGTAACTT CATTAACTGA AAAAATAACT TCATTTCAAA TTTCTTGTAA GTTACTCCCT
GCGTTTGGTA TCTGTATCTC AGAATACGGT ATGGATGTAA GTTTGTTAAG TGATTATGCT
AATTTAGCCT TACAAACAAT CAAAGGAAAG GTATTTTCCT TTTACTCCTT TTATGATAAC
GATCTACGTA ATTCACTAAT GTTAGAAAAA AAGATTGAAA ATGAAATAAC TACTGCACTA
AAGGAAAAGC AATTAGAAGT ACATATTCAG CCAAAAGTAA ATATGAAAAC AGGTCAAATT
ATTGGTGGTG AAGCATTAGT CCGTTGGAAT CATCCTCATG ATGGTTACCT ATATCCTAAT
CTCTACATAC CAGTACTTGA AAAAAGCGGT TATATCGTTG ATGTTGATAT TTATGTATGG
ACAGAGGTCT TTCAGTTCTT GCAAAAATTA ATCGAAAGAG GCGTTACACC TCTTCCAATC
TCACTCAATG TTTCAAGGCT TCATGAATAT CAAAAAGATT TCGTGGAAGT ATTGTGCTGC
TTATCAAGAG AATACAAGAT ACCTCCAAAC TTAATCACCT TAGAGATTAC AGAAAGCGCC
CTAGCCGAGG ATTCCACCTT TTTATTTCAA TGCATGGGTA AACTACAGGA AAAAGGATTT
TCTTTTTCTA TGGATGATTT TGGTTCTGGA TACAGCTCGA TGAATATGCT AAAGGACGAA
CCTCTTGACG AAGTTAAAAT TGACCGGCTC TTTTTAAGAA ACCTAGGAAA CTCAAAAAGT
CGTACCGTGA TTAGACACAT CATATTTATG CTAGCTGAGT TAGGTATTGA TATGATTGCA
GAAGGCGTAG AAACGAAAGA GCAAGAACAG TTCTTACTAG AATGTGGCTG CTATAAAGCG
CAAGGTTATC TTTATTACAA ACCAATGCCT CTAGTAGATT TCGAGAAGCT TCTATAA
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| Protein sequence | MLTEEGKEEL YLYSLKKMAE HNAATSRYNL TGLYGNNAFL YKGNECLRTH KDKKYALIRM
DLYRFKTVNE FCGRSKGDAL LIHIADCFRV YETELSIVGH LRADIFALCT PYQEIEDLIK
IVTSLTEKIT SFQISCKLLP AFGICISEYG MDVSLLSDYA NLALQTIKGK VFSFYSFYDN
DLRNSLMLEK KIENEITTAL KEKQLEVHIQ PKVNMKTGQI IGGEALVRWN HPHDGYLYPN
LYIPVLEKSG YIVDVDIYVW TEVFQFLQKL IERGVTPLPI SLNVSRLHEY QKDFVEVLCC
LSREYKIPPN LITLEITESA LAEDSTFLFQ CMGKLQEKGF SFSMDDFGSG YSSMNMLKDE
PLDEVKIDRL FLRNLGNSKS RTVIRHIIFM LAELGIDMIA EGVETKEQEQ FLLECGCYKA
QGYLYYKPMP LVDFEKLL
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