Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1045 |
Symbol | |
ID | 5741881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1316927 |
End bp | 1317427 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641292152 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001558164 |
Protein GI | 160879196 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000501046 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACA AATATGAAAC ATTAAAAGAA TACATAGTAG GAAACCAAGC AAGATTTTAT CGGTTGGCTT TTAGTTTCGT GCTTAATCAA GAAGTAGCAC TTGATGTTGT ACAAAATGCT ATCTTAAAAG CTCTAGAAAA CTATCAAAGT ATTCGAGATA TAAATTATGT ATCAACCTGG TTTTATCGAG TATTGGTAAA CGAATGCTAT GCCTATTTAA GGAATAGTAA GAGGATTGTA TTATATACGC CAGAACTTAT GCCAGAGGAA AGATATATTG AGAAGGCGTA TGAATGCTAT CAAGATGAGG TGTTTCGTGA GGTTGTTAAG CTTCCAAAAA ATATCCGTAC AGTCATCTTA CTTCGATTTT ATGAGGAACT TTCTTTAAAT GAAATCTCAG AAATAACAAA GACAAATTTA AGCACCGTAA AAACTAGACT GTATACAGGA TTAAAAAAAT TAAAAGTTAG TTTAAAGGAG TGGAAAAATG AATCATTTTA A
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Protein sequence | MENKYETLKE YIVGNQARFY RLAFSFVLNQ EVALDVVQNA ILKALENYQS IRDINYVSTW FYRVLVNECY AYLRNSKRIV LYTPELMPEE RYIEKAYECY QDEVFREVVK LPKNIRTVIL LRFYEELSLN EISEITKTNL STVKTRLYTG LKKLKVSLKE WKNESF
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