Gene Cphy_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1045 
Symbol 
ID5741881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1316927 
End bp1317427 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content31% 
IMG OID641292152 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001558164 
Protein GI160879196 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000501046 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACA AATATGAAAC ATTAAAAGAA TACATAGTAG GAAACCAAGC AAGATTTTAT 
CGGTTGGCTT TTAGTTTCGT GCTTAATCAA GAAGTAGCAC TTGATGTTGT ACAAAATGCT
ATCTTAAAAG CTCTAGAAAA CTATCAAAGT ATTCGAGATA TAAATTATGT ATCAACCTGG
TTTTATCGAG TATTGGTAAA CGAATGCTAT GCCTATTTAA GGAATAGTAA GAGGATTGTA
TTATATACGC CAGAACTTAT GCCAGAGGAA AGATATATTG AGAAGGCGTA TGAATGCTAT
CAAGATGAGG TGTTTCGTGA GGTTGTTAAG CTTCCAAAAA ATATCCGTAC AGTCATCTTA
CTTCGATTTT ATGAGGAACT TTCTTTAAAT GAAATCTCAG AAATAACAAA GACAAATTTA
AGCACCGTAA AAACTAGACT GTATACAGGA TTAAAAAAAT TAAAAGTTAG TTTAAAGGAG
TGGAAAAATG AATCATTTTA A
 
Protein sequence
MENKYETLKE YIVGNQARFY RLAFSFVLNQ EVALDVVQNA ILKALENYQS IRDINYVSTW 
FYRVLVNECY AYLRNSKRIV LYTPELMPEE RYIEKAYECY QDEVFREVVK LPKNIRTVIL
LRFYEELSLN EISEITKTNL STVKTRLYTG LKKLKVSLKE WKNESF