| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1035 |
|---|
| Symbol | |
|---|
| ID | 5741871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1307566 |
|---|
| End bp | 1309035 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641292142 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001558154 |
|---|
| Protein GI | 160879186 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTGA GACGAAGAGG TTCTTGCGCT GAGATGGATG GCATCTTACA GTATGTAGAG
GATGCTATGG CAGGCAAAGA TTGTGGTTGT TGTCCTTCAA GCAATCATGT GATTCATAGT
CGGGTAATTA AAGATTTTAA TACCTTGATT GAGAATGAAA AAAGGATGTC AAAGGCGGCA
AAAGAAGTAT TGGATATTGC AAGTTCCATC AGTAGTTTTG ATGTGGGAAT GTCTTATATT
TCAACGAAAT TAATGGATTT TGCGACTGAA ATGTCTTCTG TCAGTGAATC CAATCTCGCT
ATTGTGGAAG AGACGACTGC AACTATGAAT CAAGTAAATG AAACGATTGA TTATACAGCA
GGTACCTTAG AGAAACTGTC AAATGAATCT GAAATTCTAG CCTCTAAGAA TAATAATAGT
AAAGAATTAT TAGAAGATGT TACTGCACTA AAAGAAAATG TTATTCTAGA TACTAAGATT
ATGAACGACA AAATTGAGCA ACTTGTTGTT TTGGCAACTG AGGTTGGTAA GATTGTTGAA
AGTGTTCAAA CAATTGCAAA TCAAACAAAT TTGTTAGCGT TAAATGCAGC GATAGAAGCA
GCAAGAGCGG GAGAACAGGG AAAAGGTTTT TCTGTTGTAG CAGAAGAAGT TCGTAAGTTA
GCGGATGATA CAAAGCATAA CCTGGAAGGA ATGAGAGCTT TCGTAGATGA TATCCACAAT
GCTTCGAGAG AAGGAAAAGA AAGCATGGAT CGAGCTATGG AATCTACCAG TCAAATGAGT
GATAAGATTG ATATGGTATC CGAGACGATT GGTGAGAATA TCGAAATGCT CCAGGGTGTT
GTGTCTAGTG TTGGGGACAT ACATAATTCA ATGCAAGGAA TTAAACTTGC AGCTAATGAG
ATTAGCAGCG CGATGGAAAC ATCCAGCTCC GATGCGCAAC GTCTTACTGA AATGACACAG
GAAGTTTCTA AGGATGCTCA GGAGAGTGTA AAATATTCAA AGAGTATCTC TGAAATTGAC
GATCGACTAT CACATGAAAT AAGAGAAATG TTTGAAGGAT TGAGTACAGG TAATCAAGCA
GTTACCAATG AAGAGCTTCA ACTTGTGATT GAAAAGGCTG TAAAGGCTCA CTCTGAGTGG
ATGGTTAATT TAAAGAATAT TGTGGATAAC ATGAAGATAG CACCTATACA AACGAATTCA
CATAAGTGTG CATTTGGACA TTTCTATCAT GCACTTGTTA TAGATCATGA AGCAATTGAG
AAGGAATGGA AAGAAATCGA TGGATTCCAT GATCAATTCC ATAGAATGGG AGATAAGGTA
ATAAAAGCTG TAAAAGCACA AGATAGAAAG ATGGCGAATG ATTTATATAA TGAGGCATCT
GTTGTTTCTA CTCAGATACT TGGATTACTG CAGAAAGTTC ACCAAAAGAT AGAACAATTA
AATAAACAAG GAATAAAGAT TTTTGATTAA
|
|---|
| Protein sequence | MRLRRRGSCA EMDGILQYVE DAMAGKDCGC CPSSNHVIHS RVIKDFNTLI ENEKRMSKAA
KEVLDIASSI SSFDVGMSYI STKLMDFATE MSSVSESNLA IVEETTATMN QVNETIDYTA
GTLEKLSNES EILASKNNNS KELLEDVTAL KENVILDTKI MNDKIEQLVV LATEVGKIVE
SVQTIANQTN LLALNAAIEA ARAGEQGKGF SVVAEEVRKL ADDTKHNLEG MRAFVDDIHN
ASREGKESMD RAMESTSQMS DKIDMVSETI GENIEMLQGV VSSVGDIHNS MQGIKLAANE
ISSAMETSSS DAQRLTEMTQ EVSKDAQESV KYSKSISEID DRLSHEIREM FEGLSTGNQA
VTNEELQLVI EKAVKAHSEW MVNLKNIVDN MKIAPIQTNS HKCAFGHFYH ALVIDHEAIE
KEWKEIDGFH DQFHRMGDKV IKAVKAQDRK MANDLYNEAS VVSTQILGLL QKVHQKIEQL
NKQGIKIFD
|
|---|
| |