| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1020 |
|---|
| Symbol | |
|---|
| ID | 5741856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1289839 |
|---|
| End bp | 1291104 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641292127 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001558139 |
|---|
| Protein GI | 160879171 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAGAA AGGGAACAAT ACTTTTTTTA CCAGTATTAA TCTTATGTAG TTTAGTTAGT
GGCTGTAATA GGAAAGAAAA CAAGATAAAT GAAAATAATG AAGTGTCTAT GGAAAGTGAC
TCCTTGACAT TAGGAGGTGA ATGGAATGTG GAAGATCGTG TGAAACCACT TTGGAGTACA
AAAAGAGTAG AAGAAGAAAG TGTGATGTTA GTTTCAGTTG ATGGTGCAAT GCCTTGCGGT
AATTTGATTT TTAAGCCTAC TAAAATTATA AGTGTGTATA CTTATGATAT GATAATGGGC
ATTAAGAGAG AATGGAAAGA AGGAGAGGAC TTTGTTATAG ATGATAATCA AATCACAGCA
CTCAGTGAGG ATATACCATC TATGACATCA AAACAGGTTT TAGGGGAAGA GCGAATTCCA
GGTTTTAATT ATTCGGATAT TCCTAGTGTT ACAGCGGGAC TGTATTTACC ATTTACGGAG
GGTACTGAAA TTATATCTAA ACAGATTTAT GTAACTTATG AGCATGAAGA TGAATTTCTT
GGTCATGTAC CAACGTATGC TCTGGAAAAA TTACCACGAA CGAAAGAAAA ACTTAGGAAT
AAAGGAGAAC TTCAATTATT TGTCTATGGA GATTCTATTT CAACAGGTGC AAATAGCACA
GGGTATCTGA ATGTCTATCC TTATAAAGAC AGTTGGCCTG ATATGGTTGC AAAAAATCTA
AGCAGACACT ATGATACGGA AGTTGTTTTA TTGAATAAGG CTGTAGGTGG TTGGACAAGT
GAAAATGCTA TTAAAAGTAC AGAGTCTACA GGTTGGGTTA AGGGGAAAGA AATTAAACAA
TCAGGTATTA AGGGAACACT TGGTGAGATG CCAGATTATT ATCCTGATCT AGTTATCTTA
GGTTTTGGTA TGAACGATGC TACACTTGGA GTTGGAAAAC AAGAGTATAA ATTATATATG
AATAAAATAA TTAAAACAAT ACGAGAGCGT AATAAGGATT GTGAATTTAT TTTGTTAGGA
AGTATGTTAG CAAATCCAAT GGCTATCAAT CAATCAAAAA ATCAAATTTC TTATTTTAAA
ATATTAGAAG AAATTGTGGA AGAAAATGAA GGAATTGTTG CTGTTAATAT TGGCCAGATA
CATCAGGATT TATTAGATGC GGGCAAGGGT TATTTAGATA TGACTAGTAA CAATGTCAAT
CATCCAAATG ATTTTTTTGC AAGTTGCTAT GCTATGAGTA TCTTGTCATT ATTAATTAGC
CATTAA
|
|---|
| Protein sequence | MVRKGTILFL PVLILCSLVS GCNRKENKIN ENNEVSMESD SLTLGGEWNV EDRVKPLWST
KRVEEESVML VSVDGAMPCG NLIFKPTKII SVYTYDMIMG IKREWKEGED FVIDDNQITA
LSEDIPSMTS KQVLGEERIP GFNYSDIPSV TAGLYLPFTE GTEIISKQIY VTYEHEDEFL
GHVPTYALEK LPRTKEKLRN KGELQLFVYG DSISTGANST GYLNVYPYKD SWPDMVAKNL
SRHYDTEVVL LNKAVGGWTS ENAIKSTEST GWVKGKEIKQ SGIKGTLGEM PDYYPDLVIL
GFGMNDATLG VGKQEYKLYM NKIIKTIRER NKDCEFILLG SMLANPMAIN QSKNQISYFK
ILEEIVEENE GIVAVNIGQI HQDLLDAGKG YLDMTSNNVN HPNDFFASCY AMSILSLLIS
H
|
|---|
| |