Gene Cphy_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1008 
Symbol 
ID5743948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1273642 
End bp1274403 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content37% 
IMG OID641292115 
ProductMerR family transcriptional regulator 
Protein accessionYP_001558127 
Protein GI160879159 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAATATA CAGTAAATAA ATTAGCAAAA ATGTCGGGAA TTAGTACACG CACCCTACGT 
TATTATGATG AAATCGAATT ATTATCTCCT GAGAGAATCA GTTCGAATGG ATACCGCATA
TATGGGCAGT CACAGGTTGA CTTGTTGCAG CAGATACTAT TTTTTAGAGA ACTTGGATTG
AGTTTAGAAG AAATCAAAGA GATTATTTAT TCTAAAACAT TTGATCGTAC CAAGGCTCTA
GAAAACCATT TAGCCGCTCT ATATAAAAGG AAAGATCAGA TCGATTTGCT GATTCAAAAT
GTTAGTAAAA CATTACGTAC TGTAAAAGGA GAGGCAGTTA TGAGCGACAA AGAAAAATTT
GAGGGATTCA AACAAAAACT AGTAGAAGAA AATGAAAACA ACTATGGCAA GGAAATTCGT
CAAAAATACG GTGACAAAGT AATTGATGCT TCGAATGCGA AAGTAAAAAA CATGACGGGA
GAGCAATATG CCGAGGTGGA ACAATTATCA AAAGAAGTCA ATGAAACACT AAAAGCAGCC
TTCCTACAAG GAGACCCTTC GAGTGAGCTT GCGCAAAAAG CATGTGATTT ACACAGACAA
TGGCTTTGTT ATTTTTGGCC GGATGGGATG TATTCGAAAG AAGCGCACAA AGGACTTGCT
AGCATGTATT GTGAAGATGA GAGATTCAAG GCTTATTATG ATGCAATCAC ACCTGGTTGT
GCAGAATTTC TACGTGATGC AATTAATATC TATTGCAAGT AA
 
Protein sequence
MEYTVNKLAK MSGISTRTLR YYDEIELLSP ERISSNGYRI YGQSQVDLLQ QILFFRELGL 
SLEEIKEIIY SKTFDRTKAL ENHLAALYKR KDQIDLLIQN VSKTLRTVKG EAVMSDKEKF
EGFKQKLVEE NENNYGKEIR QKYGDKVIDA SNAKVKNMTG EQYAEVEQLS KEVNETLKAA
FLQGDPSSEL AQKACDLHRQ WLCYFWPDGM YSKEAHKGLA SMYCEDERFK AYYDAITPGC
AEFLRDAINI YCK