Gene Cphy_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0997 
Symbol 
ID5743937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1260824 
End bp1262278 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content39% 
IMG OID641292104 
Producthypothetical protein 
Protein accessionYP_001558116 
Protein GI160879148 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00113309 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCCTA ATATAAGTTT AGATAATACG TATATAACAC TACCAGAAGA ATTTTATACA 
GAACAATTAC CTAGCAAGGT ACCTTCTCCT AAGTTAGTAA AATGGAACAG TACGCTCGCG
AAGGAACTCG GTCTAGATTC TGATTTCTTT CAAAGCGAAG AAGGTGCATT AGTACTGTCT
GGTAATCAAA TATTAGAAGA TACAACACCA ATTGCAGAAG CATATGCAGG ACATCAGTTT
GGTTATTTTA CTATGCTTGG AGATGGGCGC GCGGTACTTC TAGGAGAAAT CGTTACAAAT
GATGAGGAAC GTTATGACAT TCAGCTTAAG GGCTCTGGTA GAACGCCATA CTCCAGAGGA
GGCGATGGGA AAGCAACCCT TGGCCCGATG CTACGAGAAT ATATCATTAG TGAAGGGATG
AAGGGCTTAG GAATTCCAAG CACTAGAAGT CTAGCAGTTT TAACTACAGG GGAGACAATA
CTCCGCGAAA CGGCATTGCC CGGAGCTATT TTAGTTCGAG TAGCAAAAAG TCATATACGT
GTGGGAACCT TTCAATTCGC AAATCAGTTC CTTGACACCA AGGAGCTTAA GGCACTTGCA
GATTATACAA TAAAGAGGCA TTATAAAGAA ATATTCACAA AAGAAGATAG GTATCGACAT
TTCCTCCACG AAGTTGTGAA AAATCAAGCT AGGTTAATAG CACAGTGGCA GCTAGTCGGT
TTTATTCACG GGGTTATGAA TACAGACAAT ATGGTAATTA GTGGTGAAAC TATTGATTAC
GGACCGTGTG CATTTATGGA TACTTATCAT CCAGAGACTG TATTTAGTTC TATTGATACC
GAGGGAAGAT ACGCTTATCA AAATCAGCCG AAGATGGCTT CTTGGGATTT AGCGAGGTTA
GCTGAAGCGC TGGTACCTTT GTTAAACGAT AATACGGAAA AGGCAATCGA AATTGCTCAG
GAAGAAATTA ATCAATTTTC TAAGTTGTAT CTTACGTTTT GGTACGAGGG CATGAGAAAA
AAATTAGGAC TATTCCATGA AAATGATATG GATGAAGATC TGATTGAGGC TTTACTTGGT
TTAATGGTAA AGTATGAGGC AGATTATACG AATACATTCC GTGACCTAAC GTTAAATCAG
ACAACACAAC CTAATTTGAA AGGTTCAGCT GAGTATCAAC AGTGGTTAGA TTTATGGCAG
GATAGAAGGA AAAAGCAAGA GGAATCCTTG GAGGATTCAA TTAAATTAAT GGAATCAGTA
AATCCAACCG TAATTCCTCG TAATCATAGG GTAGAAGAAG CACTTGAACG TGCTGTGAAT
TATCATGATT ATAATGCAAT GGATTCTTTG GTTTCTGTAT TACAACATCC GTATGACTAT
AAAAATCAAA ATGATTACTA TGCTACACCT CCTGGAAAGA CTGCTTGCGG ATATAGGACA
TTTTGTGGAA CGTGA
 
Protein sequence
MSPNISLDNT YITLPEEFYT EQLPSKVPSP KLVKWNSTLA KELGLDSDFF QSEEGALVLS 
GNQILEDTTP IAEAYAGHQF GYFTMLGDGR AVLLGEIVTN DEERYDIQLK GSGRTPYSRG
GDGKATLGPM LREYIISEGM KGLGIPSTRS LAVLTTGETI LRETALPGAI LVRVAKSHIR
VGTFQFANQF LDTKELKALA DYTIKRHYKE IFTKEDRYRH FLHEVVKNQA RLIAQWQLVG
FIHGVMNTDN MVISGETIDY GPCAFMDTYH PETVFSSIDT EGRYAYQNQP KMASWDLARL
AEALVPLLND NTEKAIEIAQ EEINQFSKLY LTFWYEGMRK KLGLFHENDM DEDLIEALLG
LMVKYEADYT NTFRDLTLNQ TTQPNLKGSA EYQQWLDLWQ DRRKKQEESL EDSIKLMESV
NPTVIPRNHR VEEALERAVN YHDYNAMDSL VSVLQHPYDY KNQNDYYATP PGKTACGYRT
FCGT