| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0989 |
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| Symbol | |
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| ID | 5743929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 1253941 |
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| End bp | 1255362 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641292096 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001558108 |
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| Protein GI | 160879140 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0129526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACGA TGATGATTCA GCTAAATAAA GACAGACCCT TATACCTGCA AATATACGAA
CATATTAAAA ACGGCATTAT TTCGGGTGTG TTTCAAGAGC GGGAAGCTTT GCCGTCTATC
AGAAAGTTGG CGGCGACATT ATCCGTCAGT AAAATAACAG TAGAAAAGGC TTATGACCAA
CTTTTCAGCG AGGGATATAT TGAGGGCGCT GAACGCAGCA GATTTGCCGT TGCTGCTCTT
TCAGAGCCTT TTGACCTTTA CGACGAAAAA AAACAAAAAA AGATGCCCTA TTATACTCCC
CCAAAAAAAG AGGAAATAAC CTATGATTTT TCATCCGGAG AAATGGATTC CGAGGGCTTC
GACTTTTTTC TTTGGCGTAA ATATATGAGT AGGGCGCTAC TTGATAGCGC ACGCCTGATG
AAATATGGAG AAATCCCCGG TGAGGTAGAG CTAAGGCAGC AAATCGCCAA ATATTTAATG
GAATCAAGGG GGGTAGTCGC CTCTGCAGAG CAGATTATCA TCGGGTCTAA CACACAGGTG
CTGATTGGCC AGCTTTGCAC TCTTTTTGAC CCGAATCATG ATAAAATCGC TTTTGAAAAC
CCCGGATTTA AAAATGGAAG AAGAGTCTTT TTCGACTATG GATTTGAAAT TGTTCCCATT
GAGATGACCC CGCAGGGGCT AGACGAAGCA TCCCTTAGGA AAAGCACTGC AAAAGCAGTT
TTTGTCAGCC CGTCACACCA GTTCCCCACA GGACTGATTA TGCCAGCACC CAGAAGAATC
TCTTTGCTGA ACTGGGCATA CGAAAACAAC TCTTATATTA TTGAAGATGA CTACGACAGT
GAATACAGAT ATTACGGTAA TCCTATCCCC GCTATGAAGG GGATGGATCA ATCTGATCGG
GTTATTTACA TTGGCTCTTT TTCAAAAATC ATCCCGCCAT CTATTAGAAT CAGCTATATG
ATTCTGCCTG AGATCCTAAT GAAAAAATAC CGGGGCAGAG AATCTCATTA CAGCCAAACA
GCATCTGCAA TTGAGCAAAT GACACTGTCG CTTTATATGG AGGACGGCCA GCTGGAACGA
CAAATCAGAC GCCTAAAAAA AATCTACAAC GAAAAAAGAC GCCTGTTTAT CAGTGAACTG
AAGGGCGCCT TTGGCGAAAA CGGTAAAATA TATGATAACG GCTCTGGTCT GTTTGTAATA
TTAGAGCCTA AGTTTAATAT TGACAGGGTA GCCCTAAAAG AAGCAAGCAA AAAGAACGGC
TGTCGTATTA GCTGTGTAGA GGATTTTTTA ATGGAGAAAC CGAAGAACCA CAGTTCAAAA
ATTAAACTGA TTTTATATTT TTCCAGCATA AAATCAGCTG ATATCCCAGA TGCGGTACAG
GCTTTAAAAA GCTGCTTGAC ATCTGTCAAT ATGCTAGAAT AA
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| Protein sequence | MDTMMIQLNK DRPLYLQIYE HIKNGIISGV FQEREALPSI RKLAATLSVS KITVEKAYDQ
LFSEGYIEGA ERSRFAVAAL SEPFDLYDEK KQKKMPYYTP PKKEEITYDF SSGEMDSEGF
DFFLWRKYMS RALLDSARLM KYGEIPGEVE LRQQIAKYLM ESRGVVASAE QIIIGSNTQV
LIGQLCTLFD PNHDKIAFEN PGFKNGRRVF FDYGFEIVPI EMTPQGLDEA SLRKSTAKAV
FVSPSHQFPT GLIMPAPRRI SLLNWAYENN SYIIEDDYDS EYRYYGNPIP AMKGMDQSDR
VIYIGSFSKI IPPSIRISYM ILPEILMKKY RGRESHYSQT ASAIEQMTLS LYMEDGQLER
QIRRLKKIYN EKRRLFISEL KGAFGENGKI YDNGSGLFVI LEPKFNIDRV ALKEASKKNG
CRISCVEDFL MEKPKNHSSK IKLILYFSSI KSADIPDAVQ ALKSCLTSVN MLE
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