Gene Cphy_0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0988 
Symbol 
ID5743928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1253183 
End bp1253779 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content34% 
IMG OID641292095 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_001558107 
Protein GI160879139 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000105649 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAG TATTATATAT CAAAGCTAAC ATAAAGTTAG AAGGCGTTTC AAGAACATTT 
CAGGTATCTG ATCATTTCAT AGAGGAATAT AAAAAGCAAC ATCCTGAGGA TGAGGTAGTT
GTATTAGATT TATATAAAGA AAATATTGAT TTTTTACGCC CTGAAGATTT AGAGGCAATG
GCTGATATAA ATGATGAAAC TAAGAAAAAT ACAACATTCC TTAAGTATGC TTTTCAGTTT
GCAGAGGCAG ATAAATATGT AATTGCAGCA CCTATGTGGA ACTTGGGATC CCCTGCAATA
TTGAAAGCTT ATTTCGATTA CATTACCATA ACAGGTATTA CATTCCATTA TACAGCAGAA
GGCCCAAAAG GACTTTTACA AAATAAGAAG GCGGTACACA TTGTAGCCAG AGGTGGCGAG
TATGGTAACG CTCCTTATGA AATGGGTGAT CGTTATGTAA AAACTATCTT AGGTTTCCTT
GGTGTTAGTG ATATTCAAAC GATAGCAATT GAGAACTTGG ATATTATTGG AGCTGATGTT
GAAGCTAAGG TTAAAGAAGG AAAAGAAAAA GCTGGTTTAG TAGCAAAAGA ATTTTAA
 
Protein sequence
MSKVLYIKAN IKLEGVSRTF QVSDHFIEEY KKQHPEDEVV VLDLYKENID FLRPEDLEAM 
ADINDETKKN TTFLKYAFQF AEADKYVIAA PMWNLGSPAI LKAYFDYITI TGITFHYTAE
GPKGLLQNKK AVHIVARGGE YGNAPYEMGD RYVKTILGFL GVSDIQTIAI ENLDIIGADV
EAKVKEGKEK AGLVAKEF