Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0988 |
Symbol | |
ID | 5743928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1253183 |
End bp | 1253779 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641292095 |
Product | NAD(P)H dehydrogenase (quinone) |
Protein accession | YP_001558107 |
Protein GI | 160879139 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000105649 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAAAG TATTATATAT CAAAGCTAAC ATAAAGTTAG AAGGCGTTTC AAGAACATTT CAGGTATCTG ATCATTTCAT AGAGGAATAT AAAAAGCAAC ATCCTGAGGA TGAGGTAGTT GTATTAGATT TATATAAAGA AAATATTGAT TTTTTACGCC CTGAAGATTT AGAGGCAATG GCTGATATAA ATGATGAAAC TAAGAAAAAT ACAACATTCC TTAAGTATGC TTTTCAGTTT GCAGAGGCAG ATAAATATGT AATTGCAGCA CCTATGTGGA ACTTGGGATC CCCTGCAATA TTGAAAGCTT ATTTCGATTA CATTACCATA ACAGGTATTA CATTCCATTA TACAGCAGAA GGCCCAAAAG GACTTTTACA AAATAAGAAG GCGGTACACA TTGTAGCCAG AGGTGGCGAG TATGGTAACG CTCCTTATGA AATGGGTGAT CGTTATGTAA AAACTATCTT AGGTTTCCTT GGTGTTAGTG ATATTCAAAC GATAGCAATT GAGAACTTGG ATATTATTGG AGCTGATGTT GAAGCTAAGG TTAAAGAAGG AAAAGAAAAA GCTGGTTTAG TAGCAAAAGA ATTTTAA
|
Protein sequence | MSKVLYIKAN IKLEGVSRTF QVSDHFIEEY KKQHPEDEVV VLDLYKENID FLRPEDLEAM ADINDETKKN TTFLKYAFQF AEADKYVIAA PMWNLGSPAI LKAYFDYITI TGITFHYTAE GPKGLLQNKK AVHIVARGGE YGNAPYEMGD RYVKTILGFL GVSDIQTIAI ENLDIIGADV EAKVKEGKEK AGLVAKEF
|
| |