Gene Cphy_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0980 
Symbol 
ID5743920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1247094 
End bp1247906 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content35% 
IMG OID641292087 
Producthypothetical protein 
Protein accessionYP_001558099 
Protein GI160879131 
COG category[R] General function prediction only 
COG ID[COG3694] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGATG CAATCACAAT GTTTTTTCAA TATTCCCGTG TAACTATGAA ATCATGGTTT 
CAGTACCGGG TAGATGCCTT ACTACGATCC CTTGCAGTTT TTTTACGTGA AGCGACCGGA
ATTGTATCAA TAGTTTTGGT ACTTACAAAA TTTGATATAA ATGGTATCAT TAGCTGGGAT
GTAGATGAGC TTGTGTTTTT ATACAGTTTT TTATTTAGTA CCTACGGTAT TTTAATTATT
TTTTTTACTG GGCTTCGCGA CTTTGGAAAA ACAATTCAAG ATGGTACGTT TGACCGTTTT
TTACTGCGTC CACGAGGAGT TTTATTTCAA ATCATAGCAA GTGACGCAGA TTGGTTTGCT
GCGGTTGGTC ATGGAGTGTT AGGAGTCGTA TTATTCTCAT ATGCGATAAG CAGAATAGAT
GTTGTATGGA ATCTGGGAAA CATCCTATAT TTAGCTACGG CTTTTATTGG TGGGATTTTG
ATTCAGGGAG CAATATTTTT ATTTTTTGCA AGCCTTAGTT TTTATTTTGT AAAAGCAAGT
AATGTACGTG GAGCATTATT TTGGAATCTA CGTAATCTTG CTGGTTATCC ACTTAGTATC
TTCCCTAAAA TGATACAATG CATGTTAATG TATGTTGTAC CGTTTGCATT CGTTAACTAT
TTTCCAGCTC AATATTTACT ACGAAATGAT GACCTTATCT ATTATCCAGA AGTCTATCTA
TATCTGACTC CACTTATAGG GATTGCTATG TATTTGGGAG CATATTGTTT TTGGAGAACG
GCAATAAAGC ATTATAAAAG TACTGGAAAT TAA
 
Protein sequence
MKDAITMFFQ YSRVTMKSWF QYRVDALLRS LAVFLREATG IVSIVLVLTK FDINGIISWD 
VDELVFLYSF LFSTYGILII FFTGLRDFGK TIQDGTFDRF LLRPRGVLFQ IIASDADWFA
AVGHGVLGVV LFSYAISRID VVWNLGNILY LATAFIGGIL IQGAIFLFFA SLSFYFVKAS
NVRGALFWNL RNLAGYPLSI FPKMIQCMLM YVVPFAFVNY FPAQYLLRND DLIYYPEVYL
YLTPLIGIAM YLGAYCFWRT AIKHYKSTGN