| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0972 |
|---|
| Symbol | |
|---|
| ID | 5743913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1240295 |
|---|
| End bp | 1240876 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641292081 |
|---|
| Product | endopeptidase Clp |
|---|
| Protein accession | YP_001558093 |
|---|
| Protein GI | 160879125 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000265141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGG TACCATACGT AATTGAGCAA AACGATCGAA GTGAAAGAAG TTATGATATA
TATTCTAGAT TACTAAAAGA CCGAATTATC TTTATCAATG GTGAAGTAAA TCATGTTAGT
GCTGGCTTAG TAATTGCCCA ATTACTTTAT TTAGAAGCAG AAGATTCCAA AAAAGATATT
AGGCTCTATA TTAATAGTCC AGGTGGAAGT ATACCGGATG GTCTTGCCAT TTATGATACG
ATGAGGTATT TAAAATGCGA TGTTTCCACG ACTTGTATTG GAATGGCTGC AAGTATGGGG
TCTTTTTTAT TAGCAGGAGG TACAAAGGGA AAGCGTTTTG CACTTCCAAA TGCAGAGATT
TTAATCCATC AACCATCTGG CGGGATACAA GCTCCTGCTC AAGCGACGGA TATTGATATT
ATGAGTAAAC ATATTTTAAA TACAAGAAGA CGTGTCAATC AAATTCTTTC AGAAAATACA
GGAAAAGAAA TTAGCCAAAT TGAGAAAGAC ACAGATCGTG ATTATTACAT GACAGCGGAA
GAAGCATTGA ATTATGGAAT TATTGATAAG ATAATAAAAT AA
|
|---|
| Protein sequence | MSVVPYVIEQ NDRSERSYDI YSRLLKDRII FINGEVNHVS AGLVIAQLLY LEAEDSKKDI
RLYINSPGGS IPDGLAIYDT MRYLKCDVST TCIGMAASMG SFLLAGGTKG KRFALPNAEI
LIHQPSGGIQ APAQATDIDI MSKHILNTRR RVNQILSENT GKEISQIEKD TDRDYYMTAE
EALNYGIIDK IIK
|
|---|
| |