Gene Cphy_0901 details

Gene Information

• Locus tag: Cphy_0901
• ID: 5741773
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 1153271
• End bp: 1153918
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641292013
• Product: redox-sensing transcriptional repressor Rex
• Protein accession: YP_001558025
• Protein GI: 160879057
• COG category: [R] General function prediction only
• COG ID: [COG2344] AT-rich DNA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGATA AAACAATTTC ATCAGCAGTT ATCAAGCGTC TTCCAAGATA CTATCGTTAT 
CTTGGAGAAT TATTAGAGAA TGATGTTGTG CGTATCTCTT CGAAAGAGTT AAGCGAAAAG 
ATGAATGTTA CAGCATCACA GATTCGTCAG GATCTAAATA ACTTTGGCGG TTTTGGTCAA 
CAAGGATATG GTTATAATGT AGAATATCTT TATACCGAGA TTGGTAAAAT ACTTGGTCTG 
GATAAGAAAT ATAATGTTAT TATTATTGGA GCAGGTAATT TAGGACAAGC GCTTGCAAAT 
TATACAGATT TTGAGAGAAG AGGATTTTAT ATCTGTGGGA TATTTGATGT TAATCCTAGA 
TTGATAGGAA TATCCATCCG TGGAATTGAA ATCCGTTTAA TTGATGAACT AGAAGAATTT 
ATGAAAACAA ATACTGTGAA TATAGCAGCA CTAACGATAC CAAAAGCAAA AGCACCGCAG 
GTGGCGGCAG ATTTAGTTAG CCTTGGTATT CATGCAATAT GGAATTTTGC ACCAACAGAT 
CTAAATTTAC CAAAAGATGT TATGGTTGAA AATGTTCACT TGGCAGAAAG CCTTATGAGA 
CTGTCGTATA ATTTAAAAGC GGCAGAAGAA TCGGGGGAGA GTATTTGA 

 

Protein sequence

MYDKTISSAV IKRLPRYYRY LGELLENDVV RISSKELSEK MNVTASQIRQ DLNNFGGFGQ 
QGYGYNVEYL YTEIGKILGL DKKYNVIIIG AGNLGQALAN YTDFERRGFY ICGIFDVNPR 
LIGISIRGIE IRLIDELEEF MKTNTVNIAA LTIPKAKAPQ VAADLVSLGI HAIWNFAPTD 
LNLPKDVMVE NVHLAESLMR LSYNLKAAEE SGESI