| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0882 |
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| Symbol | |
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| ID | 5741754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1132706 |
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| End bp | 1133635 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641291995 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001558007 |
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| Protein GI | 160879039 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000414792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACAAA AACTCATAAG CAAAATAGAA CAGAACAATG CACCTATCGT TGTAGGTTTA
GACCCAATGT TAAGTTATAT CCCAAAGCAT GTTTTAGAGA AAGCATATGC TGAGTTTGGT
GAAACACTTG AGGGTGCAGC AGAAGCAATT TGGCAGTTTA ACAAGGCAAT CGTAGATACA
ACCTACGACT TAATTCCAGC TGTGAAACCT CAGATTGCTA TGTATGAGCA ATTTGGAATT
CCAGGGATGA TTGCATTTAA GAAGACTGTT GATTACTGTA AGGAAAAGGA CCTTGTAGTA
ATAGGTGATA TTAAAAGAGG TGATATTGGT TCTACTTCCG CGGCTTATGC TACTGGACAC
CTTGGTAAAG TTACAGTAGG CAGCAAATCT TTTTATGGCT TTGATGAGGA TTTTGTAACA
GTGAACCCAT ATCTCGGTTC TGATGGAATT ACACCATTTC TTGATGTATG TAAGGAAGAA
AACAAAGGTT TATTTATTTT AGTGAAAACC TCAAATCCAT CCAGTGGTGA ATTTCAAGAT
CAGCTTATTG ATGGTAAACC ACTCTATGAA TTAGTTGGCA AAAAGGTTGC TGAGTGGGGC
GAGATGTGTA TGGGTGAAAA GTATAGTTAT ATCGGTGCTG TTGTCGGAGC AACTTATCCT
GAGATGGGAA AGGTTCTTCG TAAATTAATG CCTAAGACAT ATATATTAGT ACCAGGTTAT
GGTGCACAAG GTGGAAAAGC TTCTGATCTG GCTCCTTACT TTAATGAGGA TGGCTTAGGA
GCAATTATCA ATTCTTCCCG TGGAATAATC GCAGCTTACA AGCAGTCCGC TTATGAAAGT
TTTGGTGCTG CAAATTTTGC TGATGCTTCA CGACAGGCGG TAATTGATAT GAGAGAAGAT
ATTAACCAGG CATTATCTCA TAAAGAATAG
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| Protein sequence | MIQKLISKIE QNNAPIVVGL DPMLSYIPKH VLEKAYAEFG ETLEGAAEAI WQFNKAIVDT
TYDLIPAVKP QIAMYEQFGI PGMIAFKKTV DYCKEKDLVV IGDIKRGDIG STSAAYATGH
LGKVTVGSKS FYGFDEDFVT VNPYLGSDGI TPFLDVCKEE NKGLFILVKT SNPSSGEFQD
QLIDGKPLYE LVGKKVAEWG EMCMGEKYSY IGAVVGATYP EMGKVLRKLM PKTYILVPGY
GAQGGKASDL APYFNEDGLG AIINSSRGII AAYKQSAYES FGAANFADAS RQAVIDMRED
INQALSHKE
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