| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0875 |
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| Symbol | |
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| ID | 5741747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1123806 |
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| End bp | 1125716 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641291988 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001558000 |
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| Protein GI | 160879032 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000412559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAC GCGAGGCAAT ATTAAACAGA GATTTAGATG TTGTGAAGGA TCTATTAGTA
AAGGATCCAA ATTCAATTGA GGATAAAACT GGAGGAGTAT GGTTACCATT TTTGGCAGCA
TCTCTAGGAG ATTTAGAAAT TGTACGGTAT ATTGTAGAAT ATTCCAGAGC AAGTTTTAAT
GAAACAGATG AATTAAACAG AAACGTTCTT CATTATGGTG TTGAATCAGG TAACATTTCC
GTTGTTCGTT ACCTAGTAGA AAGAGTTGGA ATGTCACCGG TTTCTGGAGA TATCAACCTA
GTAACACCAT ATGAAATAGC ATACGAAAAT AAAAATAAAG AAATTCTTAC TTACTTTGAA
GAAGTTTGTG GAGCACCATA TGAACAGATG TATCATAACC CAATTCGTAC CGGTATGCAT
CCAGATCCAT CAATCATTTG TGTGGGAGAT GACTTTTATA TGGTTAACTC CTCCTTTATA
TTCTTCCCTT GTATTCCAAT CTCTCATTCC AAGGACTTAA TTCATTGGAA AGTCATTGGA
CATGCAATTA CAAACCCAGA GTGGGCGTAC TTAGATGAAC TAGAAGGTGG CCGTGGATAT
TGGGCACCAG ACATTTCTTA TTATGAAGGA AAATATTATA TTACTGCAAC CTATCGTTTA
AATGACACTG GAACTGTCTA TAGAAAACAA ATGGTTGTTT CTTCGGATAA ACCAGAAGGT
CCATATTGTG AACCAGTATT TCTTGATGAG GATGGTATTG ATCCATCTAT CTTTACGGAT
GACGATGGAA GACGCTATAT GTTATTAAAT CGTGGAGCAA GAATATTTGA GATTAGTAAA
GATGGAAAAA AACAGCTTTC CGAAGCTACC CTTTTATATT ATGGGCATCA AAAGAGAGCA
CCGGAAGGAT CGCATTTACT TAAAAAGGAC GGTTGGTATT ACCTTTTCCA AGCAGAAGGT
GGGACCGGTC TAGGTCATCG TATCTCTGTT GCCAGATCCA AAGAACTATT TGGTGTATAC
ACCCCATGCC CTTACAATCC GATTATGAGA CAGCAGGATG AAAAGGGAGC AATCAAACGT
TGTGGTCACG GAAAACCTGT GAAAACTCCA AATGGTGAGT GGTATATGGT TTACTTATGT
GGCAGACAGT TAGAGGGTGA ATATAGCTTA CTTGGACGTG AAACAGCACT CGATCCAATT
ACTTGGACAG CAGATGGTTG GCCACTTGTA AATAATCTGG AAGGACCTAG TGTCCTACAA
AAACTACCAA ACTTAACTCC ATATATTCCT GAACCGGAGT CGGATGATTT TAAGAATGGT
ATATTAAGCA GTTTATGGGT ATCTCAACGC GTACCAGAGG AGAATGCGTA TACATTTGGC
AATGGATACT TAAAGATACA GGGAAGTAAA AAAGATTTAG ATACGACAGA GTCAAGAAAT
ATTTTATTAC GCAGACAACA AGATTTTCAC TTTACGTTTG AGGTAACAGT AGGTGATATA
AACCTTAACA TTGGACAGGA TTATGGTTTA ACCTGTTATT ATGATGAAAA TACGTATCTT
AAATACGGTC TCTTCGAAAC AAAAGAAGGT TTATTCTTAC AGGTAGTGGA ACACATTGAT
GAGGAGACAA AGATAAGCCT ATCAACAAAG GTTACAAAAG GAGAGTACAG TCTTCGCATT
GTGACAGAAG GGCTTAAGAG AAGCTTTTAT TATCAGAGCA TAGTTGATCA GGAGGAAACT
AATTGGCATT CCCTTGGTCA GCTTGATCGA GTTTATTATC TATGTGATGA AGGTATCAAT
CGAGGAAAAC GCTTTACCGG TGCTATGGTA GGTATGTATG CTCACGCTGG TGAGAACTCC
TCCTTAACTG GTGAATTTAA AGACATTGTA TATCAAGGTA TGGACCGATA A
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| Protein sequence | MKLREAILNR DLDVVKDLLV KDPNSIEDKT GGVWLPFLAA SLGDLEIVRY IVEYSRASFN
ETDELNRNVL HYGVESGNIS VVRYLVERVG MSPVSGDINL VTPYEIAYEN KNKEILTYFE
EVCGAPYEQM YHNPIRTGMH PDPSIICVGD DFYMVNSSFI FFPCIPISHS KDLIHWKVIG
HAITNPEWAY LDELEGGRGY WAPDISYYEG KYYITATYRL NDTGTVYRKQ MVVSSDKPEG
PYCEPVFLDE DGIDPSIFTD DDGRRYMLLN RGARIFEISK DGKKQLSEAT LLYYGHQKRA
PEGSHLLKKD GWYYLFQAEG GTGLGHRISV ARSKELFGVY TPCPYNPIMR QQDEKGAIKR
CGHGKPVKTP NGEWYMVYLC GRQLEGEYSL LGRETALDPI TWTADGWPLV NNLEGPSVLQ
KLPNLTPYIP EPESDDFKNG ILSSLWVSQR VPEENAYTFG NGYLKIQGSK KDLDTTESRN
ILLRRQQDFH FTFEVTVGDI NLNIGQDYGL TCYYDENTYL KYGLFETKEG LFLQVVEHID
EETKISLSTK VTKGEYSLRI VTEGLKRSFY YQSIVDQEET NWHSLGQLDR VYYLCDEGIN
RGKRFTGAMV GMYAHAGENS SLTGEFKDIV YQGMDR
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