Gene Cphy_0866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0866 
Symbol 
ID5741738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1110773 
End bp1111921 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content37% 
IMG OID641291979 
Productbeta-lactamase 
Protein accessionYP_001557991 
Protein GI160879023 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACTA AGTGTTTAGA GCAATTGACA GAAATTTTGG AAAGTGAAGT TTCAAGTGGT 
AAGCTAAAAG GGTGTTCCCT CTTAGTACAA CACAAAAATG AGAGAGTGTT TCAACATTCC
TTTGGTACGG ATCAATGTGA TTCCATCTAC CGTATCTTTT CTATGACAAA GCCAGTTACT
GCAATCGCAA CCATGATATT GTATGAACGA GGATTACTTG ATTTATTTGA TCCGATATCG
AAGTATCTAA AAGGGTTTTG TAATCAGACC GTTCTTGATA CAGAGGGGGA GAGACCTGTA
AAGAAAGAGG TAACCATACA ACATCTCCTT AATATGACAT CTGGCATTGT GTATCCTGAA
AAGCTGTATC CTGCTGGTGC TAAATTTGAA GAGCTTGTAG AACAATTTAA AAAAGATAAT
ACGCATCCGA CCACTATACA AATATCCAAC TTGGTAGGTC AAGCACCATT AGCCTTTGAG
CCTGGTCAGG AATGGGCATA TGGCGCATCT GCTGATGTAC TAGGCGGTAT TGTGGAAACT
ATTAGTGGTA TGAGGTATGG AGATTTTTTA AAGAAAGAGA TATTTGAACC ACTTGGTATG
AAAGATACCG GGTTTTATTT AGAGGACGAT AAAAAAGAAC GACTTGTTCC TATGTATAAG
AAAGATGCAG ATGGTAACTT AGTGGAGATA ACCAAAGATG ATTTAACAAA TCATTTTGTA
GTAAACCCAG ATTCAAAACC ATCTTATGAA TTAGGTGGCG CAGGACTTTA TTCCACAGTA
GAGGACTACA GTAAATTTGC TGGAATGCTA CTTAGTTATG GTACTTATAA AGGGGTAAGA
ATACTTGGAA GAAAAACCAT TGAATTTATA TCTCAAAATC AATTGACTAG TAATCAACAA
AAATCTATTT GGTTTGATAG TATGTATGGC TATGGTTATG GTAACTTGAT GCGGATAATG
ATGGATCAAA GCCTAGCAGG TAGCAATGGA AGTATTGGAG AATACGGTTG GGACGGGCTA
CCTGGAACCT ATTTTATGGT AGATCCAACA GAGGAATTAA CACTTATCTA TATGCAACAG
AATTTACATG GAGCTGACCA AAGCCTAAGG AGAAAGATGC GTCAGATTGT TTATGGTTCG
CTCCTCTAA
 
Protein sequence
MNTKCLEQLT EILESEVSSG KLKGCSLLVQ HKNERVFQHS FGTDQCDSIY RIFSMTKPVT 
AIATMILYER GLLDLFDPIS KYLKGFCNQT VLDTEGERPV KKEVTIQHLL NMTSGIVYPE
KLYPAGAKFE ELVEQFKKDN THPTTIQISN LVGQAPLAFE PGQEWAYGAS ADVLGGIVET
ISGMRYGDFL KKEIFEPLGM KDTGFYLEDD KKERLVPMYK KDADGNLVEI TKDDLTNHFV
VNPDSKPSYE LGGAGLYSTV EDYSKFAGML LSYGTYKGVR ILGRKTIEFI SQNQLTSNQQ
KSIWFDSMYG YGYGNLMRIM MDQSLAGSNG SIGEYGWDGL PGTYFMVDPT EELTLIYMQQ
NLHGADQSLR RKMRQIVYGS LL