Gene Cphy_0863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0863 
Symbol 
ID5741735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1103665 
End bp1105464 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content34% 
IMG OID641291976 
Producthistidine kinase internal region 
Protein accessionYP_001557988 
Protein GI160879020 
COG category[T] Signal transduction mechanisms 
COG ID[COG2972] Predicted signal transduction protein with a C-terminal ATPase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAC TAAGAAAGCT TTTTTCAGCT ATGAAATTAA ATCATAAAAT AACTATATTA 
ATTATTGGAA CCATAGTAAT TCCTATGGTT ATTTTATCTG TCCTTCTTTT TCAAAATATG
AGGGAATCTG TCATAAAAGA AAAAGTTAAA AATGTTGAAA TCAGCATTAA TCAAAGTTAT
AACCATATTC AAAAAAATGT GGAGCTATGT CATATGTCAA CACAGGTTAT CTTAAACAGC
GAAGGCTTTT GGGATAAATT AATAGAGTTT CAGAATTCCG AAGATGTCGA CAAGAATGAA
ATCATAAAAT TCTCAAAGAA CGATGTTCGG AATATTGAAC GACTGGTAAA CAGTAACCCA
TATCTTTATC AGATAAGAAT CTACATTGGA ACTAAAAAAG TACCGGAAAT GATGCCGGTT
CTTTATTATA TGGATCGACT TGAGGTTTTC GATTGGTATG ATGAAAATGA TACGCGAAAG
ATTTTCTGGA ATTTTGATTA TGATGGCACT ATTTTTCCTT ACTATGTATT AAAACCCTCA
AAACATATCG TATCACTTAC AACACGTGTT ATAGCTACCA AGAAAAAAGT AGATGCCCTG
ATTGAAGTTG CAACGAAGAT GGATGTTATA TTTCCGGATA TATATGAAGC GAACGAAGAA
CAATGGACTT GCTTTGTAGA TGAACATGGA ACTTACTTTT ATGGAGAAGG GGACTCAAAT
CAAAAGTGGT TAGAATTTGC GGAGGGTGTA TTTAAAACAA TCCAAAAGGA TACCAAGGAG
TCTTATTATC ACAATATGTA TCTTGATAAA GAACCAGTCG TAGTTGGGTA CATACCGTTA
GAACAGTTTA ATGGTCATCT GCTAAAGATT GTATCTTTAA AAAAGGCATT CAGGGATATC
AATGACAAAA GAAATGTATT TCTCGTTGGT TTTTCTGGAG CTGTAGCAAT TTTAATCGTT
GCAGCGAACT TCTTGGTTAA ATTGGTACTT CGCGATTTTT ATCGGGTAAT TCATACCGTT
ACGAAGGTAA AAGAAGGTGA TTTAGCGATA CGAGTTCCAG TCTGCTCCTC GAACGAAATA
GGACAATTAA GCGGTCAAAT TAATGATATG ATGGACACCA TAACCGATTT GATGGAGGGG
CAATTAAAAA GAGAACTTTT AGTAAAAGAC AGTGAGATTA GAGCACTACA AAATCAAATC
AATGCTCATT TTATCTATAA CGTATTGGAA TCGATTAAAA TGATGGCTGA GATAGAAGAA
CGATATGATA TTTCAGATGC AGTTACCTCA CTTGGAAAGT TACTACGATA TAGTATGAAA
TGGGTATCAA AGAATGTAAC GGTAAGAGAA GAAGTTGACT ATATAAAAAA TTATTTGGCG
CTCATAAATC TTCGGTTTGA TTATGAAATC TATTTAAGTA TCAATATGCC AGATATCATT
TGGAGTCAAG AGATACCAAA GATGTCATTA CAACCAATTA TTGAGAATGC AATCTACCAT
GGAATTGAAG AAATTGCGGA GGATACGAGT ATCTATATGA AGGGCATCCT ATTTGAGGAT
TATTGTACGA TAGAAATTAC GGACTCAGGC AAGGGAATGA CAGAGGAAGA AGTAAGAAAA
CTTCAGCGTA AAATTTCTGG AGAGATTGAA ACTAGTGGAA GTTCCGGGAA TGGGATAGGG
CTAAAGAATG TACAAGATCG TATCAAAATC AGTTTTGGAG AACCATACGG AATCAGCGTA
GCATCAAGGA AGGACTGTTA TACAAAGGTT ATCGTTAAGA TACCATTGAT CCTATCATAG
 
Protein sequence
MRKLRKLFSA MKLNHKITIL IIGTIVIPMV ILSVLLFQNM RESVIKEKVK NVEISINQSY 
NHIQKNVELC HMSTQVILNS EGFWDKLIEF QNSEDVDKNE IIKFSKNDVR NIERLVNSNP
YLYQIRIYIG TKKVPEMMPV LYYMDRLEVF DWYDENDTRK IFWNFDYDGT IFPYYVLKPS
KHIVSLTTRV IATKKKVDAL IEVATKMDVI FPDIYEANEE QWTCFVDEHG TYFYGEGDSN
QKWLEFAEGV FKTIQKDTKE SYYHNMYLDK EPVVVGYIPL EQFNGHLLKI VSLKKAFRDI
NDKRNVFLVG FSGAVAILIV AANFLVKLVL RDFYRVIHTV TKVKEGDLAI RVPVCSSNEI
GQLSGQINDM MDTITDLMEG QLKRELLVKD SEIRALQNQI NAHFIYNVLE SIKMMAEIEE
RYDISDAVTS LGKLLRYSMK WVSKNVTVRE EVDYIKNYLA LINLRFDYEI YLSINMPDII
WSQEIPKMSL QPIIENAIYH GIEEIAEDTS IYMKGILFED YCTIEITDSG KGMTEEEVRK
LQRKISGEIE TSGSSGNGIG LKNVQDRIKI SFGEPYGISV ASRKDCYTKV IVKIPLILS