Gene Cphy_0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0848 
Symbol 
ID5741720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1082551 
End bp1083258 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content32% 
IMG OID641291961 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001557973 
Protein GI160879005 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000404744 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTATTC AGATAAAAAT GGAAGAGTTT TATCAGCGGT TTGTATCGAA TTTTATAGAA 
GATAACCGTT ATATGTACCT CGTAAGGGGA TTAATTACAA CATTAGTAAT TACATTTTTT
GCTGTAATGA TTGGTGCATT ACTTGGTTTT ATCATAGCGA TAATTCGTTC TACTTATTCA
AAAACTGGTA AGTTAAGAGT ATTAAACTTT TTATGTAATA TCTATATTAC AGTAATTCGT
GGTACACCGG TAGTTGTACA ATTATTGATT ATTTATTTTG TTATATTTGG TTCAGTTAAC
ATAAATAAAA TATTTGTAGC GGTGTTAGCA TTTGGACTTA ACTCCGGTGC GTATGTGTCA
GAAATTGTTC GTTCTGGTAT TATGTCAGTG GATGAAGGAC AGTTCGAAGC AGGTAGAAGT
CTTGGATTTA ATTATAATCA GACTATGCGA TTGATTATTT TACCTCAGGC AATTAAGAAT
ATCTTACCTG CACTCGGTAA TGAGTTTATC GTTTTGTTAA AGGAAACTTC TGTTTGTGGT
TTTATAGCAT TAGAAGATTT AACGAAAGCT GGAGATATTA TTCGTGGTCG TACTTATGAC
GCTTTTATGC CACTCATAGC AGTCGCATTA ATTTATTTGA CATTAGTTAT TATCTTTACG
AAACTAGTTA ATTATTTGGA GAGGAGGTTG AGAAACAGTG ACCACTGA
 
Protein sequence
MSIQIKMEEF YQRFVSNFIE DNRYMYLVRG LITTLVITFF AVMIGALLGF IIAIIRSTYS 
KTGKLRVLNF LCNIYITVIR GTPVVVQLLI IYFVIFGSVN INKIFVAVLA FGLNSGAYVS
EIVRSGIMSV DEGQFEAGRS LGFNYNQTMR LIILPQAIKN ILPALGNEFI VLLKETSVCG
FIALEDLTKA GDIIRGRTYD AFMPLIAVAL IYLTLVIIFT KLVNYLERRL RNSDH