Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0848 |
Symbol | |
ID | 5741720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1082551 |
End bp | 1083258 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641291961 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001557973 |
Protein GI | 160879005 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000404744 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTATTC AGATAAAAAT GGAAGAGTTT TATCAGCGGT TTGTATCGAA TTTTATAGAA GATAACCGTT ATATGTACCT CGTAAGGGGA TTAATTACAA CATTAGTAAT TACATTTTTT GCTGTAATGA TTGGTGCATT ACTTGGTTTT ATCATAGCGA TAATTCGTTC TACTTATTCA AAAACTGGTA AGTTAAGAGT ATTAAACTTT TTATGTAATA TCTATATTAC AGTAATTCGT GGTACACCGG TAGTTGTACA ATTATTGATT ATTTATTTTG TTATATTTGG TTCAGTTAAC ATAAATAAAA TATTTGTAGC GGTGTTAGCA TTTGGACTTA ACTCCGGTGC GTATGTGTCA GAAATTGTTC GTTCTGGTAT TATGTCAGTG GATGAAGGAC AGTTCGAAGC AGGTAGAAGT CTTGGATTTA ATTATAATCA GACTATGCGA TTGATTATTT TACCTCAGGC AATTAAGAAT ATCTTACCTG CACTCGGTAA TGAGTTTATC GTTTTGTTAA AGGAAACTTC TGTTTGTGGT TTTATAGCAT TAGAAGATTT AACGAAAGCT GGAGATATTA TTCGTGGTCG TACTTATGAC GCTTTTATGC CACTCATAGC AGTCGCATTA ATTTATTTGA CATTAGTTAT TATCTTTACG AAACTAGTTA ATTATTTGGA GAGGAGGTTG AGAAACAGTG ACCACTGA
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Protein sequence | MSIQIKMEEF YQRFVSNFIE DNRYMYLVRG LITTLVITFF AVMIGALLGF IIAIIRSTYS KTGKLRVLNF LCNIYITVIR GTPVVVQLLI IYFVIFGSVN INKIFVAVLA FGLNSGAYVS EIVRSGIMSV DEGQFEAGRS LGFNYNQTMR LIILPQAIKN ILPALGNEFI VLLKETSVCG FIALEDLTKA GDIIRGRTYD AFMPLIAVAL IYLTLVIIFT KLVNYLERRL RNSDH
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