| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0827 |
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| Symbol | |
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| ID | 5741700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 1055896 |
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| End bp | 1057131 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641291941 |
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| Product | spore germination protein |
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| Protein accession | YP_001557953 |
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| Protein GI | 160878985 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00912] spore germination protein (amino acid permease) |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATA AAGTAACTCT CAGGCAATTC ACATACACTT TTCTTTTGTT ATCAATTACT
CCGATTTTTT CTAGTTTGCC AGGCTTACTA GCTCCATCTG GAGATTCTAC CGGATATGTT
GCTGTATTGT ATTATGGTGT AATTGGTTGT GTCTTTGCTT GGCTTATGTA TCAAGTGTTA
TATGTATATC GAGGATACTC ACTGTTAGAG ATTCTAAGTG ATTTAGTTGG TACCGTAATT
GCTAAGTTTA TTCTTCTTGT CTATGCACTT TGGAGTGTCT TAGTAATCTT ATTTAAGATT
GGTTCCTATG CCACTTTACT TCAAACCACA CTACTTCCAA CCATATCCGC AGATATTTTA
CTTGGGTTTC TATTTTTACT TTGTGTATAT GCTTTCTCAA AAGGAAGTAA AACAATACTA
CGTTTTTCTG AATTTTTATT CCTGCCAGCA GTATTTTTCC TAGGGATTTT ATTTCTTTTT
GCGGTACCTA GTTTCCATAC AGAGTATCTA AAAACGATAA GCATTAGCTC CTTAACCGAT
AATTTGAGAA GAATTCCAAG TATCGCATCC ATCGGTGGGA ATTTAATGTT ATTACTTTTC
TTTCTAGGTA ACATTGAACA CAAACCAGAG TTACCTTGTG ATATCAATGA AGCCCCTGAT
ACTAAAGGCA AACAAAAGAG TCATCAAACC TTTCAAATAA GATTATACCG ATGCATCTTA
CAGTTTACTT TACTATGCTT TGCCTCTATC CTATTATCTC TTTGCATCAA CGGGCCAAAA
CTAACAGAAA ACTTCACCTA TCCTATTTAT CAATCAGTCA AGGGAGTCTC CATCCTAAGT
ACGTTTGAAA GATTTGATGC CTTTATAACT TTAATTTGTA TTGTATCTGA TTTTACAGCA
GTATGTGTCT TTGCATTCAT TAGTGTTACT TGCTTTAGCT TTGTGTTTCA AAAAAAGGAG
CAAGAGCAGC CAAAAGAAGA TTCAAGTGCT CCACTTGATG TTGTTTCTCC ATCAAGAAAA
ACTACACTTT TGTTATGCAT TGGCGCTCCA CTGGTGTTAA TTTGCTGTTG TTATGTTTAT
TTACGAAAAA TTACCCAGTA CGAATTAGAT GAATATTTTT TATCCTATAT GATGCCTCTT
AATCTTATTT TTCAATATGT TTTACCTACT TTACTAGGAA TTGTTTGTTT TATTAAGCGT
ATTAGCAGAG GTAAGAAGGG TAATCAGGAG GCGTAA
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| Protein sequence | MENKVTLRQF TYTFLLLSIT PIFSSLPGLL APSGDSTGYV AVLYYGVIGC VFAWLMYQVL
YVYRGYSLLE ILSDLVGTVI AKFILLVYAL WSVLVILFKI GSYATLLQTT LLPTISADIL
LGFLFLLCVY AFSKGSKTIL RFSEFLFLPA VFFLGILFLF AVPSFHTEYL KTISISSLTD
NLRRIPSIAS IGGNLMLLLF FLGNIEHKPE LPCDINEAPD TKGKQKSHQT FQIRLYRCIL
QFTLLCFASI LLSLCINGPK LTENFTYPIY QSVKGVSILS TFERFDAFIT LICIVSDFTA
VCVFAFISVT CFSFVFQKKE QEQPKEDSSA PLDVVSPSRK TTLLLCIGAP LVLICCCYVY
LRKITQYELD EYFLSYMMPL NLIFQYVLPT LLGIVCFIKR ISRGKKGNQE A
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