| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0804 |
|---|
| Symbol | |
|---|
| ID | 5745284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1028119 |
|---|
| End bp | 1029336 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641291918 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001557930 |
|---|
| Protein GI | 160878962 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000115275 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACAAAT TGAAAAAGGG ATTTATGATA TTGCTTTTGG CCACATCAAC TATGTTACTT
GGTGGCTGTA GTATAGGAAC TAGTTCTCTG TTTATACATC CGGCAGAACA GGGGTATGAG
TACGAAGTTA CATACGATAC ATTGGGTGGA AACATCAATC AAGTAGATAA ACGTGTTGTA
TACTATGCAG GAAATTCTTT ATTGTTTGAG CCAAATGGAA CAGCTGGTAT GCTTGTGCAA
CCTAAATTTG GTGAAAAGTC ATTGGTTGGT TGGTATACAA AATATACAAC AGAAGAAAGT
AAGGATGGAA CTATCTATCA TTATAATGAA GAAGATTTAT GGGATTTTTC ATTGGACCGA
GTTTCTGATG AAAATACCAG CGATAAAAAA ATAACGTTAT ATGCTAGATG GGCTGATAAT
CCATCCATTA ACTTTTTAGA TGCTGCAAAT CCTGAGGGAG ACATCTTATT AAAATGGACG
ATTAATGTTG GCAATGAATT AAAACGCCCT ACTTCCACAG AACCAAAGAA AAACGGATTT
ACCTTAATTG ATTATTATAA GGATCCGGAA TGTACTGAAA AATATGTATT TGATAAAGTG
ATTGAAGAGG GTGATATTGA TTACTCGAAT GGTGGTAAAG CTCAAATAAA TATTTATTGT
AAGTTTATTG AAGGTGAAAT AATTCGAGTT AAAACAGTAA ATCAACTGAA GGCAATCGCT
GATAAGCCAG ATGGACAATA TATATTAGCA AATGATATTG ATTTATCCAC AGAAACATGG
ACACCAATTG AAACTTTTAG CGGTGTATTG GACGGTAACG GATACTCCAT TAAAAATTTA
AACTTAAATG TTAAAAATCG CGCTTCTGGT ATTACTGCGA AAAATGCGGA TGAAGTATCA
TACGGATTAT TTTCGAAGTT AGATGGTGCA AAGATAAAAG ACCTAACAAT TAAGGATGTG
AATATTGTTA TTGATAAATC TTCCAATGTT AAACTTTGTG TTGGTGCATT AGCAGGACGT
ACTAAGAAAA CAACAATAGA AAATTGTACC TTTGATGGAA TAACGATATC ATCAGATGGT
ATGTGTAGCA TTAATATAGT CGCATCCAGT TATGTTGCCG GTGATTATTC AACCAAGATA
AACAATTGTA TATTCAACAA CATCAATACG AATAAATTAA CAACTTCTGG GAACTTAGAA
GTTATAGAGC AAAAATAA
|
|---|
| Protein sequence | MYKLKKGFMI LLLATSTMLL GGCSIGTSSL FIHPAEQGYE YEVTYDTLGG NINQVDKRVV
YYAGNSLLFE PNGTAGMLVQ PKFGEKSLVG WYTKYTTEES KDGTIYHYNE EDLWDFSLDR
VSDENTSDKK ITLYARWADN PSINFLDAAN PEGDILLKWT INVGNELKRP TSTEPKKNGF
TLIDYYKDPE CTEKYVFDKV IEEGDIDYSN GGKAQINIYC KFIEGEIIRV KTVNQLKAIA
DKPDGQYILA NDIDLSTETW TPIETFSGVL DGNGYSIKNL NLNVKNRASG ITAKNADEVS
YGLFSKLDGA KIKDLTIKDV NIVIDKSSNV KLCVGALAGR TKKTTIENCT FDGITISSDG
MCSINIVASS YVAGDYSTKI NNCIFNNINT NKLTTSGNLE VIEQK
|
|---|
| |