| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0764 |
|---|
| Symbol | |
|---|
| ID | 5743882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 986994 |
|---|
| End bp | 988166 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641291878 |
|---|
| Product | basic membrane lipoprotein |
|---|
| Protein accession | YP_001557890 |
|---|
| Protein GI | 160878922 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000134233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA AAGCGCTCAG CTTACTTATG ACAGTAGCTC TAGCAGCAAC CTTATTTGCA
GGTTGTGGAA AAAAGGATGA AGAAACAAAA GCACCAGTGG GAAGTGAGAA TTCTGTAGAT
GGAGATAAGA AAGACTTATT TGCTCCAATC GCTAAAGAAG ACTTAAAGAT TGGTGTAATC
CACATCACTA ACCCTGCGGA AGGTTCTGGT TATACATATA CTCATGATGT TGGTATTCAG
GGTATGCAGA AGAATATCGG CTTAAATGAT AATCAGATTA TTAGAAAGAA CAATGTAAAT
GATCAGGATC CTGTAGCAAT TCGTAACGCA ATTGAAGAGT GTATCGAAGA GGGAGCAAAA
TTAATCTTCG CTACAAGCTG GGGATACATG GATACTGTTG AAGCTTTGGC TGTAGAGCAT
CCGGATGTAA TCTTTTCTCA TGGTACAGGA TATAAATCAA ATGGTAGCAA CTTTAATAAC
TATTTCGGCA GAATTTATCA AGCTAGATAC TTAACAGGTA TCGCAGCTGG ATTAAAGACT
ACAAGTAATA AGATTGGTTA TGTAGCAGCT TGGGGTAAAG AAAACTCTGA GGTAACTGGT
GGTCTTGATG CATTTGCAAT GGGTGTTTAC TCTGTAAACC CAGAAGCTAA GGTTTATGTA
AAAACAACTA GTAGCTGGTT TTCTCCTGAA GGTGAAGCAG CGGCAGCGGA AGCTTTAATC
GCTCTTGGAT GTGATGTAAT TGGTCAGCAC TGTGATACAC CAAACCCTAT GACAGCAGCA
GAAGCAGCTG GAGTATTTGG CGTTGGTTAT AACTCTGATA TGACTAAGGA TGCTCCAAAG
GCAGTTCTTA CTTCTGCTCT TTGGAATTGG TCAGCATACT ACACTACAGC AGTTAAATCT
GTTATTGAAG GAACTTGGGA TGGAAGTAAC TACTTTGGTG GTATGGCAGA AGGTTTAATC
AATATTTCTC CATTATCTGA TCTTTGTGCA CCAGGTACAG AAGAGAAAAT TGCGGAAGCT
GAAGCAAAGA TTAAGTCTGG TGAATGGGAT GTATTCACTG GTGCTATCGA AACTAATGAT
GGTCAAACTA TTGGTGAAGA AGGAAAATCT TTAGATGATG CTACAATTAC TGCTGGTATC
AACTGGTATT TCAAGAATGT AGTGGAAGAC TAA
|
|---|
| Protein sequence | MKKKALSLLM TVALAATLFA GCGKKDEETK APVGSENSVD GDKKDLFAPI AKEDLKIGVI
HITNPAEGSG YTYTHDVGIQ GMQKNIGLND NQIIRKNNVN DQDPVAIRNA IEECIEEGAK
LIFATSWGYM DTVEALAVEH PDVIFSHGTG YKSNGSNFNN YFGRIYQARY LTGIAAGLKT
TSNKIGYVAA WGKENSEVTG GLDAFAMGVY SVNPEAKVYV KTTSSWFSPE GEAAAAEALI
ALGCDVIGQH CDTPNPMTAA EAAGVFGVGY NSDMTKDAPK AVLTSALWNW SAYYTTAVKS
VIEGTWDGSN YFGGMAEGLI NISPLSDLCA PGTEEKIAEA EAKIKSGEWD VFTGAIETND
GQTIGEEGKS LDDATITAGI NWYFKNVVED
|
|---|
| |