| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0733 |
|---|
| Symbol | |
|---|
| ID | 5743849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 947196 |
|---|
| End bp | 947954 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641291845 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001557859 |
|---|
| Protein GI | 160878891 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4604] ABC-type enterochelin transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAGA CTAGAGGCTT AACAAAAGCT TATGGTAATA AAAAGGTTGT AGATGACATT
TCCATTACAA TACCGAAAAA CAAGTTGATT GCCTTTGTAG GCAGTAATGG AGCAGGAAAG
AGTACACTAT TGTCCTTAAT TGGGCGTACC TTGGATCGAA GTAGTGGCGA GTGTCACATA
GATGAGAAAG AGGTAAAGGA ATGGAACAGT AGAGAGCTAG CGAAACGACT TTCTATCTTA
AGCCAAACAA ATCACCTCAA TATTCGCCTT ACGGTACATG AGCTCGTGCA GTTTGGTCGT
TTCCCATATA GCCAAGGGCG TTTAACAAAA GAGGATGAAA AGAAAGTTGC AGAGGCAATA
TCCTACATGA GTATCGATGC CTTTAAGGAT CGCTACTTAG ATGAATTAAG TGGTGGTCAA
CGTCAAATGG CTTATATAGC AATGTTAATA GCACAAGATA CAAAGTATGT CTTTTTAGAT
GAGCCACTCA ATAATCTTGA TATGAAACAC TCCGTACAAA TTATGAAAAT CCTAACCAAA
ATGGTGAAGG AGCTTGGGAA AACGGTTATG GTGGTAATTC ACGATATCAA CTTTGTCTCC
TGTTATGCAG ATTATATTAT TGCAATGAAG GATGGGAAAA TAATTGCCAA TGGACCAAGT
GAAGAGGTTA TGAATTCACA GATGTTACAA GAAGTGTTTG GTATGGAAAT TAAGGTAGAA
CAAATTGAAG GTAATAAAAT CTGTCTTTAT TATACTTAA
|
|---|
| Protein sequence | MIKTRGLTKA YGNKKVVDDI SITIPKNKLI AFVGSNGAGK STLLSLIGRT LDRSSGECHI
DEKEVKEWNS RELAKRLSIL SQTNHLNIRL TVHELVQFGR FPYSQGRLTK EDEKKVAEAI
SYMSIDAFKD RYLDELSGGQ RQMAYIAMLI AQDTKYVFLD EPLNNLDMKH SVQIMKILTK
MVKELGKTVM VVIHDINFVS CYADYIIAMK DGKIIANGPS EEVMNSQMLQ EVFGMEIKVE
QIEGNKICLY YT
|
|---|
| |