| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0706 |
|---|
| Symbol | |
|---|
| ID | 5743822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 914234 |
|---|
| End bp | 914629 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641291818 |
|---|
| Product | LrgA family protein |
|---|
| Protein accession | YP_001557832 |
|---|
| Protein GI | 160878864 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000156699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATG CAAGGCAGTT CGGTATTATT CTAGCAGTAA CATTTGTCGG AGAGGTATTA
AGATATTGTA TCCCGTTACC GATACCCGCA AGTATTTATG GGTTAGTTAT TATGTTAGGA
CTTTTGGCGT CCAAAATAGT ACCGGTAAAA TCTGTGAAAG GTGCTGGCAG TTTCTTAATC
GAGGTCATGT CGCTTATGTT TATTCCCGCC GGTGTCGGGT TAATGATTTC CTGGAATGCA
ATCCGTGATA TTTGGCTACC CCTGATATTT ATTATTATCA TAACCACGGT AGTAGTTATG
GTAGTGACGG GTAGAATTAC GCAAAGAGTC ATAGTGCAGG ATGGTAAGAA AAATAAGGAA
TCAGTTACGG AATCGAATGG GAGGAAAGAT AAATGA
|
|---|
| Protein sequence | MKYARQFGII LAVTFVGEVL RYCIPLPIPA SIYGLVIMLG LLASKIVPVK SVKGAGSFLI
EVMSLMFIPA GVGLMISWNA IRDIWLPLIF IIIITTVVVM VVTGRITQRV IVQDGKKNKE
SVTESNGRKD K
|
|---|
| |