| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0704 |
|---|
| Symbol | |
|---|
| ID | 5743820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 911972 |
|---|
| End bp | 912658 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641291816 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001557830 |
|---|
| Protein GI | 160878862 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00127495 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA TACTTATTTG CGACGATGAA CCCGGCCTCC GCGCTGTAAT CAAACGATAT
GCGCTGTTTG AAGGGTATGA AATTGCAGAA GCGGAAAACG GAATGGAAGC TGTCGAGGCC
TGTCGAAATG ATACGTTTGA TATTATTATT ATAGATATTA TGATGCCGGA ACTTGATGGT
TTTTCCGCTG TGAAGGAGAT TCGGAAAAAA TCGAATACCC CAGTTATTAT GCTCTCAGCT
CGCGGAGAGG AATACGATAA GGTTTTAGGA TTTGAACTTG GTATTGACGA CTATGTTGTT
AAGCCGTTTT CATCAAAAGA AATTATGCTG CGTGTAAACG CCATTTTGAG GAGAACCCAA
AAGAGCGTAG CGAATTTCGA TAGTGAAGAA GGACATATTA TTTTCCGTAA AGAAGGATTC
GAAGCCGATA TGACTGCGTA CAAAGTTTTT ATTGACGGCG TTCAGGCAAA CATGGCTCCG
AAAGAATACG ATCTTCTTTT CTTTCTGATA CGCAATAAAA ATAAAGCTGT TCCGCGTGAA
AATATATTGA CGGAAGTATG GGGATTTGAT TATTGCGGAG ATGATCGTAC ACTTGACACA
CACATGAAAT TATTACGTAG ATCGTTGGGG CCTTATGCGA ACTTTATTAC GACACTGAGG
GGATTGGGCT ACCGATTTGA GGGCTGA
|
|---|
| Protein sequence | MAKILICDDE PGLRAVIKRY ALFEGYEIAE AENGMEAVEA CRNDTFDIII IDIMMPELDG
FSAVKEIRKK SNTPVIMLSA RGEEYDKVLG FELGIDDYVV KPFSSKEIML RVNAILRRTQ
KSVANFDSEE GHIIFRKEGF EADMTAYKVF IDGVQANMAP KEYDLLFFLI RNKNKAVPRE
NILTEVWGFD YCGDDRTLDT HMKLLRRSLG PYANFITTLR GLGYRFEG
|
|---|
| |