Gene Cphy_0685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0685 
Symbol 
ID5743801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp889606 
End bp890292 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content39% 
IMG OID641291797 
Producturease accessory protein UreF 
Protein accessionYP_001557811 
Protein GI160878843 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATT ACGTTTTAAA TCTGCTTCAA TTATGCGACT CAACCTTTCC AACCGGTGCA 
TTTAGCCATT CTTTTGGCCT CGAGACCTAT ATTCAGGATG GTATTATTTT TAATAAAGAG 
ACTTTTTCCA AATGGAATAA AGCTTATATC AAAGAACAGT TGGTATACTC AGATGGTCTT 
GCCTGCCGCT TGGCTTATGA GGCTCTTGAG AATAATGACA TGGATACCAT ATGGATGTTA 
GATGGCATGT TACGAGCACA GATTTTGGCT AGAGAAAGTA GAGAAGGTAG CAGAATCATA 
GGGGAAAGGT TGTTAACCTT GGGTAATCAA CTCTACCCCT CTTCACGACT TACTTCTTAC 
GTAGATAGAA TAGCGAAAGG GGTCAGCTAT GGCCACCCAG CAATTGCATT TGCCTTGATT 
TCACATTCTC TCTCTATTCC AAAGAATACT ACTGTTATGA GCTACTTATT TTCCTCCAAT 
GCAAACCTTG TACAAAATGC TGTTCGTGGT ATTCCTCTCG GTCAAACACA AGGTCAACAG 
CTTATTAAGG AATCTCAAGA TTTTATCGCT GATGCTTGGA ATTTAATTGA AACGCTTACA 
GAAGACGATT TCGGTATAAC GGCTTCAGGC ATTGAAATTT CTCAGATGAG GCATGAAGTA 
TTACACATTC GTATCTTTAT GTCTTAA
 
Protein sequence
MDNYVLNLLQ LCDSTFPTGA FSHSFGLETY IQDGIIFNKE TFSKWNKAYI KEQLVYSDGL 
ACRLAYEALE NNDMDTIWML DGMLRAQILA RESREGSRII GERLLTLGNQ LYPSSRLTSY 
VDRIAKGVSY GHPAIAFALI SHSLSIPKNT TVMSYLFSSN ANLVQNAVRG IPLGQTQGQQ 
LIKESQDFIA DAWNLIETLT EDDFGITASG IEISQMRHEV LHIRIFMS