Gene Cphy_0667 details

Gene Information

• Locus tag: Cphy_0667
• ID: 5743783
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 871581
• End bp: 872183
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 641291779
• Product: TetR family transcriptional regulator
• Protein accession: YP_001557793
• Protein GI: 160878825
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000000042492
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGAAA AAACGGAAAG CAAAAAGTTT GTCCGAATGA GTAATGAAAA AAGAAGCAGG 
CAGATATTAG AGACGGCTTG TCGCTTGTTC GCGAATAAAG GGTATGACGC AGTAACGACA 
AAGGAGATTG CTAAGGCTAC GGACTGTAGT GAAGCATTGA TTTTCAGATA TTTTCCTACC 
AAGGAAATTA TATATCAGGA ATTATTTGAT GAGTGGAAGG CTGGTATGAA GGATCCGGTA 
ATACTTGAGA TGGTTGAAGA ATCAGCATTA AAAACCCTGG AGAAGTTTTA TCTGGATATA 
ACCGGCAATA AATTTGTGAA GGGCACAAAA ATAAGCCCTA AGCTGGAAGG AGCCATCTAT 
TCTAGAGTCA GTAAGCATAA AGAAATAATC AAAGTCATTG AAAACAGCCC TGATATGATT 
AAGGATACGA TTGAACCTGT TATTCTGAAG GGACAGGAGA CAGGCGAAAT TAAAGCAGGA 
AGCAGCTCCT TGATGGCTCA GACCTTCTGG ACTTTAATTG CTGGTGAATG GTATTTTTCC 
AGGAATTTTG CCGGAGTTCA CCCTAAGTTG TCCTTTGAGT ATATTAAGGG AATACTATTC 
TAA 

 

Protein sequence

MAEKTESKKF VRMSNEKRSR QILETACRLF ANKGYDAVTT KEIAKATDCS EALIFRYFPT 
KEIIYQELFD EWKAGMKDPV ILEMVEESAL KTLEKFYLDI TGNKFVKGTK ISPKLEGAIY 
SRVSKHKEII KVIENSPDMI KDTIEPVILK GQETGEIKAG SSSLMAQTFW TLIAGEWYFS 
RNFAGVHPKL SFEYIKGILF