Gene Cphy_0638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0638 
Symbol 
ID5741687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp830291 
End bp831775 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content40% 
IMG OID641291750 
Productglutamyl-tRNA(Gln) amidotransferase, A subunit 
Protein accessionYP_001557764 
Protein GI160878796 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATAA CAAAATTAAC TGCCATAGAG CTTTCGAAAA AGATTAAACA AAAAGAACTC 
TCAGTAGAGG AAGCAGTGAA AGCAACGTTT TCTGCAATAA AAAAAAGGGA GCCTTATTAT
CATAGTTATA TCACTGTGAA TGAAGAAGAA GCACTGGAGC AGGCGAGTAA AATTCAAATA
GCAATAGAAG CAGGAAAATT TGCAGATTCT CCTCTTGCAG GAGTACCAAT AGCAATTAAG
GATAATATTT GTGTAAAAGG GATGCGAACA ACCTGTGCGT CAAAAATATT AGAGGATTTT
ATACCTCCTT ATAATGCTTC TGTAATAGAA CGATTAAAAG ATGCGGGAGC TATCATTCTT
GGTAAGACAA ATATGGATGA ATTTGCGATG GGGAGTACAA CAGAAACCTC CTATTTTGGA
GCTACCAAAA ATCCTTGGAA TATAGAATGT ATCCCAGGAG GTTCAAGCGG TGGGTCAGCG
GCAGCTGTTG CAGCGGAAGA AGCATTTATT GCTTTGGGAA CTGACACTGG AGGCTCTATT
AGACAGCCAA GTGCTTTCTG TGGTGTGACT GGAATAAAGC CAACGTATGG AACCGTATCC
AGATATGGAT TAGTTGCATA CGCTTCCTCC CTTGATCAGA TAGGTCCAAT CGCTCGCAGT
GTATCCGATT GTGCTGCGAC ACTTCAAGTT ATATCTGGTG CAGATGACAA AGATTCTACT
TGTGTAAAAG CAGCATCTTA TGATTATGTG AGTGCATTAA GGTCAGATGT TAGGGGCCTA
AGAATAGGGA TACCAAGAGG ATATTTCTCG GAAGGCCTTG ACGCTGAAGT TAAAAAACAT
GTATTAGAAG CGGCAGCATT TTTTAAGGAG CAAGGAGCTA TAGTAGAAGA GTTTGATTTG
GAAGCTGTAG ACTATGCGAC ACCAGCTTAT TATGTTATAG CATCTGCCGA GGCTAGTTCT
AACCTTTCCA GATACGATGG TGTAAAATAT GGTTACCGAA CTGCAGATTT TGATGGCTTA
CAAGAATTAT ATAAAAAGAC GAGAAGCGAA GGCTTTGGTG AGGAAGTAAA ACGCAGAATG
ATGATCGGAT CCTTTGTATT AAGTTCTGGA TATTATGATG CTTATTATAA CAAAGCACTG
AAAGTGAGAG CCTTAATAAA GCAAAGCTTT GACCGTGCAT TTGAACGATT TGATATTATA
CTTGGACCAA CAACTCCAGC GGCAGCACGA AAACTTGGAC AGAGTTTATT CAATCCTGTG
AAAATGTTCC TTGGTGATAT CTACACAGTT TCTGTTAATT TAGCAGGTCT ACCGGCAATT
AGCTTACCAT GTGGGTTAAG TGAGGAAAGT TCATCCGACA AGTCGGCTGG TATGCCAATT
GGATTACAAT TAATCGGAAA ACCTTTTGGA GAAAAAGACA TAATAAGAGC TGCGTATACT
TTGGAACAGA CAAAAATATA TCAGCGCCCA AAGTTAATTG ATTAA
 
Protein sequence
MEITKLTAIE LSKKIKQKEL SVEEAVKATF SAIKKREPYY HSYITVNEEE ALEQASKIQI 
AIEAGKFADS PLAGVPIAIK DNICVKGMRT TCASKILEDF IPPYNASVIE RLKDAGAIIL
GKTNMDEFAM GSTTETSYFG ATKNPWNIEC IPGGSSGGSA AAVAAEEAFI ALGTDTGGSI
RQPSAFCGVT GIKPTYGTVS RYGLVAYASS LDQIGPIARS VSDCAATLQV ISGADDKDST
CVKAASYDYV SALRSDVRGL RIGIPRGYFS EGLDAEVKKH VLEAAAFFKE QGAIVEEFDL
EAVDYATPAY YVIASAEASS NLSRYDGVKY GYRTADFDGL QELYKKTRSE GFGEEVKRRM
MIGSFVLSSG YYDAYYNKAL KVRALIKQSF DRAFERFDII LGPTTPAAAR KLGQSLFNPV
KMFLGDIYTV SVNLAGLPAI SLPCGLSEES SSDKSAGMPI GLQLIGKPFG EKDIIRAAYT
LEQTKIYQRP KLID