Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0617 |
Symbol | |
ID | 5743531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 802351 |
End bp | 804156 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641291729 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_001557743 |
Protein GI | 160878775 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000118268 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGTA AATTATTTAT ACATCGTTTT TTTACATACT TTTCCATACT TTTGATCCCT ATCATTTTTA CCTTACTTTT TTATTCCTTT GTAACAATTA AGGATTTAAA GCGCCAAGGG CAAGCGAATA CTGTATCTTC CTTAACCGCA TATAATAGTA TTTTAGAGAC AGCGCTTGGT AACGCGACCT ATCAAAGCAA TTTATTTACT AGTGCTCCAA GAATCACTCT AAGCTTAAAA AAAATCTTAT CAAAAAATGA AATGACTTAT TCAGAAATTG TTCTATTTAA TAATTTACAA GCAATCTTAA ATTCCTCTTT GAATTCAAAT TTGTTTATTG ATTCTATCTA CGTAAGTCTT GATTTTTATA GTCGATATTT ACGCTCTGGT ATAGGGATTC AAAATATTGC AGAATGTTCT GATCAGGATT GGTATACAAG GTACCTAGAT TATGATGGTA CTCGTAAAAT TTGGACCTGT AGAAGAACCT TTTATGAGTA TGGTCGTGAA AAAGAAGTTA TTACTGTTTA CATGCGGCTT TCTTTAGCAC ACGGTGTATT TGCTGTTAAT CTAGATATAA ATCGTTTGGC AAATTTCTTC CTGCAGTCAA GCTTTTTAGA GAAGGAACAT ATTATCTTAT TAAATGACAA AAATGAATTG ATTTTATCGA ATGAGACGAA AGGACTTAAT TTTGACCTTG TAGATTATCT AAATGAGGGA AAACTAAGTC TAGATGCTTT AGAACAGTTA ACCCCAACCC GTTTTACTCT AAATAATAAA GAGTATTACA TCACCCTAAA ATCATCGCAT CAGTATGGCT TAAATACATT ATCCATAATT GCTACAAAAG ATTACAATAT CTTAGGCAAT TATTTTAAAA CTACTATGCT ACTATTAGCT ATCTGTTGTA TCGTATTAGC ATTATTTATC GCAACACTTA TTACATATAA AAATATACAA CAGTTTAATC ATCTGATAAC TGTCTTAAGT AATGCTGAGA AGGGGATTTT TCACATAGAG AATGACAAGC GCTATCGCTT AACTGATGAG TATGACTTAA TCTTTAATGA GGTTATTCAT ACATTTATTA AAAACGATTA TTTAAAAACA CAAATAGCGG AAAAACAATA TAAAAAGCAA ACAGCAGAAT TGATTGCATT ACAACTGCAA ATCAACCCGC ATTTCCTGTT TAATACTTTA CAATTGCTAG ATTTAGAAGC TTATCAACAA ACCAAAGTAC CAACAAGCAT AAATACAATC ATTCAAGAGC TTTCAACAAT TTTAAAATAT GCGCTAGGTG ATCCGCAATC CATTGTAACG TTAAGGGAGG AACTTGAGCA TTTAAGAGCT TATGTTGATA TCAATTACCG AAGATACTGT AATATGTTCA TCGTATACTA CGATTACGAA GAAGAGATTT CAGATTATTA TTTATTTCGA ATTCTATTAC AACCATTAAT CGAAAACAGT CTATATCATG GGATACGTCC ACTCAATGGT TCCAGGCAAG GATATATTAA ACTCAAAATT TATGAAAGAG ATAATTACCT TAATTTTTAT ATTATTGATA ATGGAATAGG CATGGATACC GAAGAATTGC AACAGTTAAA TGAGTTATTG AAACCATCTG ATATTACGAC TAAACATATC GGACTAGCCA ATACCAATCG AAGGCTGATC CTAAACTTTG GTATGGATAG TGCGTTAAAG ATCCGAAGTA AGAAAAATTA TGGAACAATT ATTTCGTTTC GGATACCAGT AATGAAAACT AAGGATGAGT GGGTTGTAAA AGTTTCTTAT TTCTAG
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Protein sequence | MKRKLFIHRF FTYFSILLIP IIFTLLFYSF VTIKDLKRQG QANTVSSLTA YNSILETALG NATYQSNLFT SAPRITLSLK KILSKNEMTY SEIVLFNNLQ AILNSSLNSN LFIDSIYVSL DFYSRYLRSG IGIQNIAECS DQDWYTRYLD YDGTRKIWTC RRTFYEYGRE KEVITVYMRL SLAHGVFAVN LDINRLANFF LQSSFLEKEH IILLNDKNEL ILSNETKGLN FDLVDYLNEG KLSLDALEQL TPTRFTLNNK EYYITLKSSH QYGLNTLSII ATKDYNILGN YFKTTMLLLA ICCIVLALFI ATLITYKNIQ QFNHLITVLS NAEKGIFHIE NDKRYRLTDE YDLIFNEVIH TFIKNDYLKT QIAEKQYKKQ TAELIALQLQ INPHFLFNTL QLLDLEAYQQ TKVPTSINTI IQELSTILKY ALGDPQSIVT LREELEHLRA YVDINYRRYC NMFIVYYDYE EEISDYYLFR ILLQPLIENS LYHGIRPLNG SRQGYIKLKI YERDNYLNFY IIDNGIGMDT EELQQLNELL KPSDITTKHI GLANTNRRLI LNFGMDSALK IRSKKNYGTI ISFRIPVMKT KDEWVVKVSY F
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