| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0609 |
|---|
| Symbol | |
|---|
| ID | 5743523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 792393 |
|---|
| End bp | 794711 |
|---|
| Gene Length | 2319 bp |
|---|
| Protein Length | 772 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641291721 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001557735 |
|---|
| Protein GI | 160878767 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1511] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR03057] X-X-X-Leu-X-X-Gly heptad repeats
[TIGR03061] YhgE/Pip N-terminal domain
[TIGR03062] YhgE/Pip C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATA TTTTTAAACA AAAGAAGTAT GTCCCATACT TAATTTTAAT TGGTGTAATC
ATCGTACCCT TACTTTATAG TTACTTCTAT CTAGGAGCAT TTTGGGATCC TTATTCCAGT
TTGAAAGATG TTCCTGTTGC AATCGTTAAC GAAGATACTG GTGCAATGAT TAAAGAAAAC
TATCATAACC TTGGTGAAGA AATGTGTGAT AGATTAAAGA ACGATGCAAC TCTAAATTTT
ATTTTTACTG ATGCTTCTGC TGCAGAGAAT GGCTTAAAAG GGAAAAAATT CTATGCAACT
ATTACGATAC CAAGTAACTT TTCAGAAGAC ATCGCATCTT TAAGCGAACC TGAAAAACAA
ACAGCAACAA TTACTTATTC ATCAAACGAA AAAAGAAACT ACCTAGCAAC ACAGATACTA
AATACGGCCG TAGCTAAGAT TGAAGCATCC GTACGTTCTA CGGTAAATGA GGAGATCGTA
AGTACATTGT CCAATAATTT AAAAGAGACT CCAGAAAAAT TAACAACTCT TTCTGAGGGA
TTAACTAAAT TACAAAATGG TACTGCGGAT TTAAAAAACG GAACCTCCTC CTTGAAAGAT
GGTGCTGGTA CCCTAAATGA AGGTATGTCA ACACTTATAA CAGCAACGAC ATCTTTAAAG
GAAGGTGCAA ATTCTCTTAA GGAAGGCGCA AATTCTTTAA AAACTGGGGC AAATCAACTT
GTTTCTGGCA GTACTACTTT AAAATTAGGT CTTATTTCAT ACGGAAGTAA ATGGACTGAG
TTTACAAAAG GTCTTGAGAC AGTAAAAGAA GGAAGCTTAA CTATAAAAAC GAGTTTAGAA
ACACTAAATC AAGGTCTAGA AAAGCTAGAA AGCGGTGCTG TGAAGTTAGA TACCGCAACA
AATGGTTTAT CAAGTATTGT AAATGGCTCT TCTTCACTTG CTACTGGAGT TGATACCTTA
CAGAATTCAA TCACCTCCTA TACACAAGGT GTTGATTCAC TTCTTGGAAA TATTTCAGAC
ACCACTCAGG CACTCGCAGC CTATGCAAAA CAAACTGGTG ACCCAACCAT TACTAAAATT
GTAGCAAATC TAACCAATGA GAAGAATATT GCAAATCTAA ATGCTCTAAA AAATGCTTCT
TCTGCATTAA ACACTGGTGT TAATTCTCTA TCTTCTGGTA TTCATACACT CTCAGATGGA
GCACAAAATT TAACACAGTT AAAGAATAGT ATTACTGAAT TAAAAAATGG ACTCATCTCC
GCAAAACAAG GTGCCACTTC CTTGGCTTTA GGTGCTGGTA ATTTAAATGC AGGTTTAAAT
ACTTTATACT CTGCAGGTGG TGAATTTACA AAAGCAACCT CACAACTAAC CATTGGGGCA
ACCTCCTTAA ATAACGGATT ATCCTCACTC ACAAAGGGTA TCGATACGCT TGCTGTAGGT
TCTACATCCC TTTATAATGG CGCTGACAAA TTAAACAATG GTGCTTCCTC TTTAGGTGAG
GGCATGAATA CCCTTATTTC TGGCGTTACT ACGCTTGACG ATGGCGCCAG TCAGCTTAAA
GATGGTATAA CGACAGCAAA TGAAGGTGTT AAGACCTCCA TCAATAGTGC AAGTGAACAA
TTGAAAGCGC TAGAAGGACT TGATACGTAT GTTGGCAATC CTGTAACTGT AGAAAGCAAA
GCTTATGAAC CTGTACCAAA CTATGGAACA GCCTTTGCTC CTTATTTTAT GTCACTCTCC
TTATGGGTTG GCGGACTTAT GATTTTCTTT GGTATTTACT TTGACCCTGA TTGCAGATTT
AAGATACTTT CTAGACGCTC CAATCAAGTT ATCAAACGTA CTTTCGCTTA CTTGATCATT
GGATTACTCC AAGCTATCTT ATTATGTATT GTGTTATTGG CAGGACTAGG ATTAAATGTT
CAGAATATTC CTTTATATTT CATTTCCTCC TGCTTGGTAT CCATGGTATT CATCGCAATC
ATTCAATTAC TGTTACTATT CTTTAGTAAC ATGGGAAAGT TCCTGGCTAT TTTACTTTTA
ATATTACAAT TAACTTCTTG CGGTGGTACC TTCCCTATGG AAACTGTACC AAAATTATTT
AATGTTCTAT ACCCATTTAT GCCAATGACT TATTCCGTAG GATTATTCAA GGAAGCAATT
AGCGGCACAG GCAATACTTC TCTAATTCTA TACAATTCTC TCATCTTATT AGGCATTTTA
GCCGTAACCA TTGGACTAAC GATATTATTC GCTATTTTGA AGAGAAAGAA TGAGAAGAAT
GAGTATCCAT TTGGAGATGC CATGCCAGAA TCTATTTAA
|
|---|
| Protein sequence | MKDIFKQKKY VPYLILIGVI IVPLLYSYFY LGAFWDPYSS LKDVPVAIVN EDTGAMIKEN
YHNLGEEMCD RLKNDATLNF IFTDASAAEN GLKGKKFYAT ITIPSNFSED IASLSEPEKQ
TATITYSSNE KRNYLATQIL NTAVAKIEAS VRSTVNEEIV STLSNNLKET PEKLTTLSEG
LTKLQNGTAD LKNGTSSLKD GAGTLNEGMS TLITATTSLK EGANSLKEGA NSLKTGANQL
VSGSTTLKLG LISYGSKWTE FTKGLETVKE GSLTIKTSLE TLNQGLEKLE SGAVKLDTAT
NGLSSIVNGS SSLATGVDTL QNSITSYTQG VDSLLGNISD TTQALAAYAK QTGDPTITKI
VANLTNEKNI ANLNALKNAS SALNTGVNSL SSGIHTLSDG AQNLTQLKNS ITELKNGLIS
AKQGATSLAL GAGNLNAGLN TLYSAGGEFT KATSQLTIGA TSLNNGLSSL TKGIDTLAVG
STSLYNGADK LNNGASSLGE GMNTLISGVT TLDDGASQLK DGITTANEGV KTSINSASEQ
LKALEGLDTY VGNPVTVESK AYEPVPNYGT AFAPYFMSLS LWVGGLMIFF GIYFDPDCRF
KILSRRSNQV IKRTFAYLII GLLQAILLCI VLLAGLGLNV QNIPLYFISS CLVSMVFIAI
IQLLLLFFSN MGKFLAILLL ILQLTSCGGT FPMETVPKLF NVLYPFMPMT YSVGLFKEAI
SGTGNTSLIL YNSLILLGIL AVTIGLTILF AILKRKNEKN EYPFGDAMPE SI
|
|---|
| |