Gene Cphy_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0604 
Symbol 
ID5743518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp785091 
End bp786692 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content38% 
IMG OID641291716 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001557730 
Protein GI160878762 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATAA GAAATACTTT AAGAACTATC GTTGTCTTAT TGTTAGTCTT TTCTGTGACA 
AGCACAGTTG TGGTATTTTA CCAGATTGAC AAAATGCAGC TTGATGGAAC TGTTATCAAT
TCATCTGGCG TCGTGCGGGG TGCAACCCAG AGGTTAATTA AGCTGGAAAT GGCTAAAAAG
CCTGATGACG GACTTATAAA TAAATTGGAC GGAATTATAA ACGGTCTGAT AGAAGGTGAC
ACTGGTTTGG GCTTGCCAAA AGCCACTGAT GCGGCCTTTA TCGACCAAAT GAACAAAGTT
AAAAACGAAT GGCAGTCATT AAAGGCTTCC ATTGAAGTTG CCAGAAAAAC CGGAAATTTT
GATTCTTTAG TAACTGAAAG CGAAAATTAT TTTGCATCCA CCAATGCAGC GGTAACAGCT
GCCGAAGCGT TTGCATCCGG AAAAGTTGTA AGCTTAAAAT ACATACAAAC AACTTTGATG
ATAATGAATA TATCTCTCTT TGTTGCTATT TGGTTTATAA GCTCAATAAG GATTTCAAAT
CCGCTTAAAA AGCTTATAAA GATTATAGAA GATTTAAATG TATCGGAAAA AATTCCTGAG
AAGTTCTTAA ATCGTAAAGA TGAGATAGGA GAGCTTTCAC AGGCCTTTGG AAAAGTAATC
AATGACATAA AAGCTTTAAT TGAAGGTATA GCTGTAACTT CGGACAAACT TACCGAATCT
TCATTTGTTC TAAGCGGTAT AAGCGATGAA ACATCAGATT CTTTTATGGA GATTGCCAAA
GCTATTGAAG GTATAGCCGG AGGGGCCTCT GACCAGGCTT TGGAAACACA AAAAGGTGTC
AGTGAAATGG AAAGCCTTGG AATATTGGTA AATGAGGATC AAAACAAGGT TGAGGAGCTA
AGGTTAGTTG CTGACCGTGT CAACGAGCTG AAAAATGAAG GTACTGCAAT TTTAGGCGAC
CTGATTGAAA AAACGGTACA AAACGGAAAA GCTGCTAAAG AGGTTCGGAC TACTATAATA
GAGACCAATG AAAGTGCTAA GGATATTGTC AATGCAAGCC AGATGATCAA ACAAATATCA
AACCAGACGA ACCTTCTAGC GTTGAATGCA GCCATAGAAG CGGCAAGAGC AGGAGAACAC
GGAAAGGGCT TTGCAGTTGT AGCAGATGAG ATAAGACAAC TGGCAGAGAA CTCAAACAAA
TTTACTTCAG AAATTGAAAA AATAACTAAT ATGCTTACAC TCAAAACTGA TGAGGCTGTA
AAGAAGATAG AAGAAATGGA TATGGTTGTA AAAATACAAT CAGAGAGCGT ATCTTCCACT
GAAGCCAAAT TTTCAGGAAT AGCTTATGCT ATTGATGATA TTAAAAAATA TATAGACAGC
ATAAGCCAGT CAACCGATGA AATAGCAAAT AAGAATATAG TGATTATTGA TATGATTCAA
AGCTTATCAG CTATTGCAGA GGATAGCGCC GCAAACACAC AGGAAATGTC GGCATCGGTA
GAGGAACAGG CTGCAGCAAT GGACCAGATT GCTGAAGCCA GTAAAGTATT ATCCCAATTG
GCTGAAAAGT TAAATGGGAG CATGAAACAA TTTAAAAAGT AA
 
Protein sequence
MNIRNTLRTI VVLLLVFSVT STVVVFYQID KMQLDGTVIN SSGVVRGATQ RLIKLEMAKK 
PDDGLINKLD GIINGLIEGD TGLGLPKATD AAFIDQMNKV KNEWQSLKAS IEVARKTGNF
DSLVTESENY FASTNAAVTA AEAFASGKVV SLKYIQTTLM IMNISLFVAI WFISSIRISN
PLKKLIKIIE DLNVSEKIPE KFLNRKDEIG ELSQAFGKVI NDIKALIEGI AVTSDKLTES
SFVLSGISDE TSDSFMEIAK AIEGIAGGAS DQALETQKGV SEMESLGILV NEDQNKVEEL
RLVADRVNEL KNEGTAILGD LIEKTVQNGK AAKEVRTTII ETNESAKDIV NASQMIKQIS
NQTNLLALNA AIEAARAGEH GKGFAVVADE IRQLAENSNK FTSEIEKITN MLTLKTDEAV
KKIEEMDMVV KIQSESVSST EAKFSGIAYA IDDIKKYIDS ISQSTDEIAN KNIVIIDMIQ
SLSAIAEDSA ANTQEMSASV EEQAAAMDQI AEASKVLSQL AEKLNGSMKQ FKK