| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0601 |
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| Symbol | |
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| ID | 5743515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 779904 |
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| End bp | 780683 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641291713 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001557727 |
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| Protein GI | 160878759 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR02764] polysaccharide deacetylase family sporulation protein PdaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTTG AGATTGATAA AGACAAATTG GAGAAATGGT GTAAAACTGG AATTTTAGTA
CTTTCCATCA TCTTAGTTAT AGCGGTAGGA GTTTATTTTG TTCCAAAGAT TATTGCGAAA
GCAGCAGGAG AGAAACGAGA ACTACCGATT TATTGTGTAC AGACAGAGAA AAAACAAGTT
GCATTATCCT TTGATGCAGC CTGGGGGAAT GAAGATACTG CACGGATACT AGAAATATTA
AAGAAACAAA ATGTTAATGT CACATTTTTT ATGACCGGTG GCTGGGTTGA AAAATACCCT
GATGATGTAA AAGCAATAGC GGCAGCCGGT CATGATTTGG GAAACCATAG TGAAAACCAT
AAGCAGATGT CAAAGCTTTC AAAAGAGCAG TCGGTAAAGG AAATAATGTC ACCGCATGAT
AAGGTTAAAG CACTTACTGG TAAGGATATG CAACTTTTTA GACCACCTTT CGGTGACTAT
AATAATACCT TGATTCAAGC AACAAAAGAA TGTGGGTATT ACTGTATTCA ATGGGATGTG
GATTCCCTAG ATTGGAAAGA CTACGGAAAA GATAGCATTC TTAAACAAGT CTTAAATAAT
AAACATCTAG GAAATGGTTC CATTATACTT TGCCATAATG GTGCTAAATT TACCGCAGAC
GCATTGGAAG AATTAATTGT AGGGTTAAAA GATAAAGGTT ATGAAATCGT GCCTATTTCT
AAGTTGATCT ACACAGAGAA TTTTGAGATG GATCATGAGG GAAGACAGGT ACAGAAGTAA
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| Protein sequence | MQFEIDKDKL EKWCKTGILV LSIILVIAVG VYFVPKIIAK AAGEKRELPI YCVQTEKKQV
ALSFDAAWGN EDTARILEIL KKQNVNVTFF MTGGWVEKYP DDVKAIAAAG HDLGNHSENH
KQMSKLSKEQ SVKEIMSPHD KVKALTGKDM QLFRPPFGDY NNTLIQATKE CGYYCIQWDV
DSLDWKDYGK DSILKQVLNN KHLGNGSIIL CHNGAKFTAD ALEELIVGLK DKGYEIVPIS
KLIYTENFEM DHEGRQVQK
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