| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0567 |
|---|
| Symbol | |
|---|
| ID | 5743481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 730286 |
|---|
| End bp | 731383 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641291679 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001557693 |
|---|
| Protein GI | 160878725 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4509] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03064] sortase, SrtB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0576914 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTATA AAATTTCAGC AAGACAAAAA ATAGATAAAA TAAAAGCTAC AAAATTTAAT
TCAAATCAGA ATATGAACGA CTCAAAAGAT AATTCAATAC ATAACAATAA AAAATTGCAG
CTTAATAAAA TCCTCCATAT ACTCTCTTTT ATTATATTAA TGATAGGTAC TTATCTACTG
ATTGACCTTC TATGGATTAG TCCTATGAAA TCAAACAATG CAATGAAAAA GATCCAGCAG
ATATATGAAA AAAGCACTCC TATCCCTGAA GATACTATAG CCCCCTCAAT TCCGAAGGCA
ATTGATGATC AAGTGTCATC AGGAAAAACA TCCGAAATAA TACCTATAGA AAAATTCAAA
CAACTATTAG AACTTAATCC TGACATTAAA GGTTGGATTC AAATAGAAGG AACCAATATC
AACTATCCAG TACTACAATC CAGTAAGGAG GAACCAGAAT ATTACTTGAC GAGGAATATC
AATAAGGAGG AGGACCGATT AGGTAGTCTT TTTTTAGATA CAAATACAGA GATTGAGACA
CCAACGCAAT GTTTATTAAT CCATGGTCAT AATATGACAA GTACTGGTAA TATGTTTCAC
GAATTGATGA AATTTAACGA TATGGACTTT TTGATTAATT CTCCAATTAT TCAATTTGAT
ACACTATATG ACGTAAGCTT ATGGAAAATT TTTGCTGTTT TTAAAACAAA CGGTTCCTCA
GCAAAAGAAG AACTCTTTGA TTATCAACGT GGAAGCTTTG AAGATTCCTC AGATTTCTTA
AATTTTGTTT ATCAGATAAA AGTTCGTTCC ATTTATAATA TACCTGTAGA AATTTCCAAG
GAAGATCAAC TGCTATTATT ATCAACCTGC TCTTATGAGC TTCCTAATTA TCGCACTGTT
ATCGTAGCTA GAAAATTGAG GCCAGGAGAG TCCAAAGAAC TATCGAGGGA ATCCGTAACG
AAAAATAAGA CTCCTCTTTA TCCAGATAGC TGGTATCAAC AATACGGTGG AATTCCTCCA
GCTATTACTA ATTTTGAAGA AGCACAAAAG AATCATGATA TTAATTGGTA TCAAGACTTT
ACGAATGGCA CAAGATAA
|
|---|
| Protein sequence | MGYKISARQK IDKIKATKFN SNQNMNDSKD NSIHNNKKLQ LNKILHILSF IILMIGTYLL
IDLLWISPMK SNNAMKKIQQ IYEKSTPIPE DTIAPSIPKA IDDQVSSGKT SEIIPIEKFK
QLLELNPDIK GWIQIEGTNI NYPVLQSSKE EPEYYLTRNI NKEEDRLGSL FLDTNTEIET
PTQCLLIHGH NMTSTGNMFH ELMKFNDMDF LINSPIIQFD TLYDVSLWKI FAVFKTNGSS
AKEELFDYQR GSFEDSSDFL NFVYQIKVRS IYNIPVEISK EDQLLLLSTC SYELPNYRTV
IVARKLRPGE SKELSRESVT KNKTPLYPDS WYQQYGGIPP AITNFEEAQK NHDINWYQDF
TNGTR
|
|---|
| |