Gene Cphy_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0562 
Symbol 
ID5743476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp722075 
End bp722869 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content36% 
IMG OID641291674 
ProductABC transporter related 
Protein accessionYP_001557688 
Protein GI160878720 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAT TACAGACAAT ACAAATAAAT GAACTTACTT GGCAGCCACA AAAAGAGGAG 
GATGCAATCT TAAAAGAGAT ATGTGCGACT TTTTTACAGG GAGGGTTTTA CGGTATTTTG
GGGCCAAACG GATCCGGAAA AACCTCATTT ATTCGCCATA TCCTAAGATT GTTACCAGTA
GAGTCAGGAA GAATATTCCT TGAAAATAAG GAAATTACAA GTTATAAACG TAACGATATA
GCGAAAAAGA TGTCCCTAGT CCCACAAAAC ACCAACATCG AAACAAGATT CACAGCATAT
GAAATTGTGA TGATGGGGCG AGCACCTTAT CAAAAAAGGT TTCAAGCAGT CAGTGATAAG
GATAGAGAAA TTGTAAACGA AGCTATGAAG ATGACGAATT GCTATCACTT ACGTGAAGCT
ATATTTTCCA GGTTAAGCGG TGGAGAAAAA CAGAGGGTTA TTACAGCTAG AGCAATCGCT
CAGCAGACAC CTTGGTTGTT TTTAGACGAA CCAGTAGCTC ATTTGGATGT TCGGTATCAG
ATGGAATTAA TGAAATATTT AAAGAAGTTA AATGATACGA AGAACACATC GATTATAACT
GTACTTCACG ACATCAATTT AGCTGCAAGG TATTGTAAAC AGATTGTTTT AATGAAAGAT
GGAAGAATCG TAGCAGCAGG GGAAACAAAA CAAGTATTAA CGATTGATAA TCTGAATCAA
GTATTTGAAA TTCTCTTCTA TGAACTAGAG AATGAAGCAT TAGGTGGTAC TTATTTCATT
CCAACTCCGT CTTAG
 
Protein sequence
MDKLQTIQIN ELTWQPQKEE DAILKEICAT FLQGGFYGIL GPNGSGKTSF IRHILRLLPV 
ESGRIFLENK EITSYKRNDI AKKMSLVPQN TNIETRFTAY EIVMMGRAPY QKRFQAVSDK
DREIVNEAMK MTNCYHLREA IFSRLSGGEK QRVITARAIA QQTPWLFLDE PVAHLDVRYQ
MELMKYLKKL NDTKNTSIIT VLHDINLAAR YCKQIVLMKD GRIVAAGETK QVLTIDNLNQ
VFEILFYELE NEALGGTYFI PTPS