Gene Cphy_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0546 
Symbol 
ID5743460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp702304 
End bp704553 
Gene Length2250 bp 
Protein Length749 aa 
Translation table11 
GC content33% 
IMG OID641291658 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001557672 
Protein GI160878704 
COG category[C] Energy production and conversion 
COG ID[COG1145] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG GAATTGTAGC AGATCTAAAT GATATGAATT TAGATGTTTG GTTGTCTACT 
TATGCTTTAC AAGAAGCGTT AAAAGAAATG GAACATATAT CAGTTGTAAT TCACCATTCC
TTTATAAATA GTGAGGATGG AGAAAAGCTA GGGCCAAAAG AGCTTGCCTA TGAGTTTTAT
AATGTTGTGG AAGGAAGTTC ACAGCTTAGT AATGATGCTG GATATTATAA TTTATTCGAT
ATTTATCTTG TGGCAAGTGA GAGAATGTGG CAGAAGGTAA AAGATAATAC AATTAAAGAA
TATTATCCAA TCCATTATTT ACGAGATTCT ATCCTCTTAA TGCAACAAAA AAACTATCAC
CCACTTGCTA AGAAGAAATC AATTAACGAA GATTATCTTC TCTGCTATTA TGAGACTCCT
TCCAAGGAAA AATTAGAGTT TCTTAAGTTT CTTTTGGATA AAAAGAGCCT TAAGCTAGTA
TCAAACCAGA TGGGAAATAA TGAACTTAAA AGCTTACAAA GCTATACAGA TCAAGATATC
AGAGAATTCT TACTCTATCT ACGTCATGCC AAGGTTGTAA TTACTGATTC GGGATTTATT
GCCTCTATGG CTCTTCTATA TGAAAAACCA TTCTTATTAC TATCGGAAAA AACACAGGAG
GTTTTAGCAG CAGGAATCTT AAAGGAATTA GGATTGTCTA GCCTTATCCT TTCCGATTTA
TCTACATCGA GAGATATTAG TATCTATAAC TCTTTGTTGG AAACTTATGA AAATAATCAG
CGGGAATTTA GAAAACGCAT CAAAGATTTT AGAAAAGAAC AAAAGAAAAA ATTAAGCCAA
TTAATAAGAT TAGCCAGTTA TGAGATGTAT GTTGATTGCC CAACGGATAT TAAAAAGATT
GAGTGTTGTG GATGCACAGC TTGTAGAGAA GTATGTCCTT ATAATGCGAT TGAAATGAAG
CCGGATGAGG AAGGATTTAT CTATCCGGTT GTGGATCATG ATAAGTGCGT CAAATGTATG
CTTTGTAAAA AAGTCTGTGT AAAAAGAGAA AATCCACAGA CGATTACTTA TGAAAAAAGA
GAAAATCAGC AGACAAATAA TAATGTAAAA AAAGAAAATC CACAGACGGA TACTAGTGTA
AGAAAAGAAA GTTCACAGAC GAATACTAGT GCAAGAAAAG AAAGTTCACA GACGAATACT
AGTGTAAGAA AAGAAAATTC ACAGACGAAT ACCTATGCGA AAAAAGAAAA TTTTCAGACA
TTTACTAATG AAAAAAAAGA AAATCCACAG ACGATTACTT ACGCAAAAAA AGAAAATTCA
CAAGCGATTT CTCATGCAGA AAGTTATCCC ATAGTATACG CAGTAAATAA TAAAAAGCTT
AAGGTAAGAA CTAATAGTTC TTCTGGTGGT ATCTTCCCAG AATTGGTTCA ATATGTAATA
GAAGAATTAG AGGGATATGT AGTTGGTGTT AAGTTTGATA ACGATATGAA TGCAGTTTCT
TCGATTGCAC ACACCATGGA GGAAGCAAAG GAATTCTATG GAGCAAAGTA TACCAAGAGT
GATTTTACCG GAATGTTTCG GAATGTAAAA AAGCTTTTAG ATAAAGGGGA AACGGTTCTT
TATTCTGCTC TTCCATGTGA GGCTGCAGGT CTTCGGGCAT TTTTAAGAAA AAGATATGAT
AACCTTATTG TTAGTGAAGT ACTATGCCAT GCGGGACCAT CTCCACTTGT ATTTCGCAGG
TATGTTCAGT ATTTAGAGTC ACGTTTTCAT TCAAAGGTTA AAAAAATAAA TTTTCGAGAT
AAATCAAAAG GATGGCTTGC ACTTGATAAT ACCATGGTTG TAGAGTTTGC AAATCGAGAA
CCGCTAAAGC TTCGGGCAAG AAGAAACAAT TATTATCGTA GCTTTATTAA AGATAATATA
GCAAGGCCTG CTTGCAGTCA GTGTTCTTTT GTATATACCA ATCGAGTCGG AGATTTAACG
ATGGGTGATT TTTGGGGAAT TCAGTATGCA AAACCAGAGA TGTTTGACAA TAAGGGTACT
AGTATATTAA TGATTAACAC TAAGAATGGA GAAAATATCT GGAATAAAAT ATCGAATCGT
TTCGAATATG AAGAAAGCAA CTTGACGGAA GCATTTCGTT ACAATCATAA GAAACCTATA
AAATTAACAG AAAAGAGAAA TGAATTCTTT GATCGATTTG AAAAAGAAGA AATCAATTCT
TTATTGCAAG AATTTAATGA TTTAAAATAA
 
Protein sequence
MKIGIVADLN DMNLDVWLST YALQEALKEM EHISVVIHHS FINSEDGEKL GPKELAYEFY 
NVVEGSSQLS NDAGYYNLFD IYLVASERMW QKVKDNTIKE YYPIHYLRDS ILLMQQKNYH
PLAKKKSINE DYLLCYYETP SKEKLEFLKF LLDKKSLKLV SNQMGNNELK SLQSYTDQDI
REFLLYLRHA KVVITDSGFI ASMALLYEKP FLLLSEKTQE VLAAGILKEL GLSSLILSDL
STSRDISIYN SLLETYENNQ REFRKRIKDF RKEQKKKLSQ LIRLASYEMY VDCPTDIKKI
ECCGCTACRE VCPYNAIEMK PDEEGFIYPV VDHDKCVKCM LCKKVCVKRE NPQTITYEKR
ENQQTNNNVK KENPQTDTSV RKESSQTNTS ARKESSQTNT SVRKENSQTN TYAKKENFQT
FTNEKKENPQ TITYAKKENS QAISHAESYP IVYAVNNKKL KVRTNSSSGG IFPELVQYVI
EELEGYVVGV KFDNDMNAVS SIAHTMEEAK EFYGAKYTKS DFTGMFRNVK KLLDKGETVL
YSALPCEAAG LRAFLRKRYD NLIVSEVLCH AGPSPLVFRR YVQYLESRFH SKVKKINFRD
KSKGWLALDN TMVVEFANRE PLKLRARRNN YYRSFIKDNI ARPACSQCSF VYTNRVGDLT
MGDFWGIQYA KPEMFDNKGT SILMINTKNG ENIWNKISNR FEYEESNLTE AFRYNHKKPI
KLTEKRNEFF DRFEKEEINS LLQEFNDLK