| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0544 |
|---|
| Symbol | |
|---|
| ID | 5743458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 698717 |
|---|
| End bp | 699220 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 641291656 |
|---|
| Product | winged helix family two component response transcriptional regulator |
|---|
| Protein accession | YP_001557670 |
|---|
| Protein GI | 160878702 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA ATACAAGCTT TATTACGGTG GATTCAGCTC TAGTCAGATG GATTCGCGAT
AAAATAAATA TAGAACAGCC AAACTCTGTG TATTCGAAAG AACTTCTTCA AGGATTAAAC
GACTTAATTC AAAGTGAAGA TTCTACTCTA ATATTAAGTA TGACTAATAA TTCAAAAAGT
TTTATAGATA ATATAGATGA TAACATTTAT GCGGGAGACC TTTCCATCTA CCTAAAAAGT
AGAAAAGTGC TTCGTAAGGA TTTAGAAATC AGTTTGACAC CGAAAGAATT TGATATTCTA
TATTTTCTTG CCCAAAACAG AGGATACGTA TATACGAAAG AACAGATATT TCAAGCAGTT
TGGGAAGAAG ATTATCTAAT GTCGGATAGT AATATTATGG CTTTTATTCG TAAACTTCGC
AAAAAAATAG AACCAAATCC AGATGAACCT GAATACATTA TTACCATATG GGGAATTGGA
TATAAATTTA ATGACCAATA CTAA
|
|---|
| Protein sequence | MKKNTSFITV DSALVRWIRD KINIEQPNSV YSKELLQGLN DLIQSEDSTL ILSMTNNSKS
FIDNIDDNIY AGDLSIYLKS RKVLRKDLEI SLTPKEFDIL YFLAQNRGYV YTKEQIFQAV
WEEDYLMSDS NIMAFIRKLR KKIEPNPDEP EYIITIWGIG YKFNDQY
|
|---|
| |