| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0541 |
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| Symbol | carB |
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| ID | 5743455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 691351 |
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| End bp | 694551 |
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| Gene Length | 3201 bp |
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| Protein Length | 1066 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641291653 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001557667 |
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| Protein GI | 160878699 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAGA ATAATAACAT TAAGAAAGTT TTAGTGATTG GTTCCGGCCC GATTGTGATT
GGCCAGGCAG CAGAGTTTGA TTATGCAGGT ACCCAAGCTT GTCGTTCTTT AAAGGAAGAA
GGAGTTACAG TTGTATTGGT GAACTCAAAT CCAGCAACGA TCATGACAGA CAAAGACATC
GCAGATATGG TTTATATAGA GCCATTAACT CCTGATGTAG TAAAGAAGAT TATTTTAAAA
GAAAAACCAG ACAGTGTACT TCCAACCCTT GGTGGTCAGG CAGCGTTAAA TATTGCAATG
GAGTTAGAGG AATCTGGATT CTTAGCAGAA ACAGGGACCA AATTAATTGG AACTACCTCA
TTAACCATTA AAAAGGCAGA AGACCGTTTA GAGTTTAAGA ATACAATGGA GAAAATCGGG
GAACCTTGTG CAGCCAGCGT TGTAGTTACT ACAGTACCGG CGGCAGTTGA CTTTGCAGAG
ACCATCGGTT ATCCAGTTGT AATCCGTCCA GCCTATACTC TTGGTGGTTC TGGTGGTGGT
ATCGCAGCGG ATAAGGAAGA ATTAATTGAT ATCTGTACGA ATGGATTACG CCTTAGCCGT
GTGGGACAGT GTTTAATCGA GCGTTGTATC GCTGGGTGGA AAGAGATTGA ATATGAAGTA
ATGCGTGATG GTGCAGGAAA CTGTATTACG GTATGTAACA TGGAAAACTT AGACCCAGTA
GGTGTTCATA CAGGAGATAG TATCGTAGTT GCTCCATCTC AGACACTATC CGATAAAGAA
TACCAGATGT TACGTACCTC TGCATTAAAT ATTATTACAG AAATAAATAT TACAGGTGGA
TGTAATGTAC AGTATGCATT AAAGCCGGAT AGCTTTGAGT ACTGTGTAAT TGAAGTTAAC
CCTCGTGTAA GCCGTTCTTC TGCGCTTGCC TCTAAAGCAA CCGGATATCC AATTGCGAAG
GTCGCAGCGA AGATTGCACT TGGTTATACC TTAGATGAGA TTCCAAATGC AATTACAGGT
AAAACCGTAG CAAGCTTCGA ACCAGCACTT GATTACTGTG TAGTAAAGAT TCCAAAGTGG
CCATTTGATA AGTTTATTAT GGCAAAGAGA ACCTTAACGA CTCAGATGAA AGCAACTGGT
GAAGTAATGA GTATCTGTAC GAACTTCGAA GGTGCTCTTA TGAAGGCAGT ACGTTCTCTA
GAACAGAATA TCTATAGTAT GAACTATGGT GACTATAGCA AGGACAGCGT GGAAGATATA
CGTGAGAAAC TTCACTTGAT TGATGACAGA CGTATCTTTG TTATCGCAGA GGCAATCCGC
CGAGGAATTA CACCAGAAGA AATTAATGAT ATTACAAAGA TCGACTTATG GTTTATTGAT
AAAATAGCAA TACTTACGGA GATGGAAAAA CGCTTAAGTG AAGAACCATT AACGAAAGAG
TTAATGTTAG AAGCTAAGCG TATGGAATTC CCAGATCGTG TGATTGCCCA GTTTAGTGGA
AAGACGTTAG AGGAAGTGAA GAAGCTTCGT AAAGAAGAGT ATGAAATTCA TGCAGCATTT
AAGACCGTTG ACACATGTGC AGCAGAGTTT GAAGCTCAGA CCCCTTACTA CTATTCCTGC
TTTGATAGTG AGAATGAAGT GGATGCTACT AAGACAAAGA AGAAAGTATT GGTACTTGGT
TCTGGCCCAA TCCGTATCGG ACAGGGTATT GAGTTCGACT ACTGCTCCGT ACATGCAACT
TGGTCTATGA GTAAGAGCGG CTTCGAGACA ATTATCGTAA ATAATAATCC GGAAACAGTA
AGCACAGACT TTGATATCGC AGATAAGCTT TACTTTGAGC CATTAACTCC AGAAGATGTG
GAAAATATCG TAGATCTGGA ACAGCCAGAT GGTGCAGTAG TACAGTTTGG TGGTCAGACA
GCGATTAAGT TAACTGAAGC ACTTCTTAAG ATGGGAGTTC CAATCTTAGG AACCAGTGCA
GAAAATGTTG ACGCTGCTGA AGATCGTGAG TTATTCGATG AAATTCTTGA GAAGTGCTGT
ATTCCTAGAC CAGCTGGTAA GACTGTATTT ACCACGGAGG AAGCAATTGT AGCTGCAAAT
CAATTAGGTT ATCCAGTACT TGTTCGTCCT TCCTACGTAC TTGGCGGTGC AGGAATGCAA
ATTGCAATCT GTGATGATGA CGTTCGTGAG TTTATGGAAA TCATTAACCG AAATGTTCAG
GAACATCCAA TCCTTGTAGA TAAGTATTTG ATGGGAAAAG AAGTCGAGGT GGATGCAGTA
TGTGATGGCG AGGATATCTT AATCCCTGGT ATCATGGAGC ACATCGAGAG AGCAGGTATT
CACTCAGGTG ATAGTATCTC TGTTTACCCA GCACAGAGTA TAAGTAATAA GGTACAGGAT
GTAATCGTTG ATTATACAAG AAAATTAGCG AAGTCCTTAA ATGTAATCGG TTTAATCAAC
ATCCAGTTCA TTGTATATAA TGAAGAAGTT TACGTAATCG AGGTTAACCC AAGATCCTCC
CGTACGGTAC CATACATTAG TAAGGTAACA AATATTCCAA TCGTTTCGCT TGCATCGAAG
GCAGTTCTTG GAGAAAAAAT TGCAGATTTA GGATATGGCA CAGGACTTGC AAAGAAAGCA
GATTATATTG CGATTAAAAT GCCTGTTTTC TCCTTCGAGA AACTTCGTGG TGCAGACATT
GGCTTAGGAC CAGAAATGAA GTCTACAGGT GAGTGCCTTG GTATCGCAAA AACTTTCAAT
GAAGCATTAT ATAAAGCATT CCTAGGTGCT GGTATCAATC TCCCAAAGCA TAAGAAGATG
ATTCTAACCG TAAAGGATGC AGATAAATTA GAAGCAGTAT CAGTAGGTAG AAGATTTAAA
GCCCTTGGAT ACGAAATTTA TGCAACAAGA AGTACTGCAA GAGTATTAAA GGAAAATGGA
GTGGATGCAA TTCCAGTTCA GAAGGTAGAC GGAGAATCTC CTACCATTTT AGACTTGCTT
CTTGGTCATG AAATTGACTT AGTAGTGGAT ACTCCAACCC AGGGACGTGA TAAATCCAGA
GATGGTTTCG TAATCCGTCG TATGTCGATT GAAACAGGTG TAACTTGCTT AACTTCTCTT
GATACAGCAA ATGCATTACT GACAAGTTTA GAAAATGTGG CCGATGGCGA ATTAAGTTTG
ATTGATATAG CAAGAATTTA A
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| Protein sequence | MPKNNNIKKV LVIGSGPIVI GQAAEFDYAG TQACRSLKEE GVTVVLVNSN PATIMTDKDI
ADMVYIEPLT PDVVKKIILK EKPDSVLPTL GGQAALNIAM ELEESGFLAE TGTKLIGTTS
LTIKKAEDRL EFKNTMEKIG EPCAASVVVT TVPAAVDFAE TIGYPVVIRP AYTLGGSGGG
IAADKEELID ICTNGLRLSR VGQCLIERCI AGWKEIEYEV MRDGAGNCIT VCNMENLDPV
GVHTGDSIVV APSQTLSDKE YQMLRTSALN IITEINITGG CNVQYALKPD SFEYCVIEVN
PRVSRSSALA SKATGYPIAK VAAKIALGYT LDEIPNAITG KTVASFEPAL DYCVVKIPKW
PFDKFIMAKR TLTTQMKATG EVMSICTNFE GALMKAVRSL EQNIYSMNYG DYSKDSVEDI
REKLHLIDDR RIFVIAEAIR RGITPEEIND ITKIDLWFID KIAILTEMEK RLSEEPLTKE
LMLEAKRMEF PDRVIAQFSG KTLEEVKKLR KEEYEIHAAF KTVDTCAAEF EAQTPYYYSC
FDSENEVDAT KTKKKVLVLG SGPIRIGQGI EFDYCSVHAT WSMSKSGFET IIVNNNPETV
STDFDIADKL YFEPLTPEDV ENIVDLEQPD GAVVQFGGQT AIKLTEALLK MGVPILGTSA
ENVDAAEDRE LFDEILEKCC IPRPAGKTVF TTEEAIVAAN QLGYPVLVRP SYVLGGAGMQ
IAICDDDVRE FMEIINRNVQ EHPILVDKYL MGKEVEVDAV CDGEDILIPG IMEHIERAGI
HSGDSISVYP AQSISNKVQD VIVDYTRKLA KSLNVIGLIN IQFIVYNEEV YVIEVNPRSS
RTVPYISKVT NIPIVSLASK AVLGEKIADL GYGTGLAKKA DYIAIKMPVF SFEKLRGADI
GLGPEMKSTG ECLGIAKTFN EALYKAFLGA GINLPKHKKM ILTVKDADKL EAVSVGRRFK
ALGYEIYATR STARVLKENG VDAIPVQKVD GESPTILDLL LGHEIDLVVD TPTQGRDKSR
DGFVIRRMSI ETGVTCLTSL DTANALLTSL ENVADGELSL IDIARI
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