Gene Cphy_0537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0537 
Symbol 
ID5743451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp685938 
End bp687008 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content39% 
IMG OID641291649 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_001557663 
Protein GI160878695 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01123] branched-chain amino acid aminotransferase, group II 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0280854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAATA TCAGATATGA GAAAACAACT GCACCTAAGG AACTTCCTGC AGCTGACAAT 
CCATTAAAAT TTGGTACTAT ATTTACCGAT CATATGTTTC TTATGGATTA TGAAGAAGGT 
AAGGGTTGGC ACGACGCTCG AATTGTTCCT TATGGACCAA TTTCATTAGA ACCATCCGCT 
ATGGTATTTC ACTATGGTCA GGAGATGTTT GAAGGATTAA AAGCATATAA GACAGAGGAT 
GGAAGAACTT TATTATTCCG TCCAAATAAA AATGCAGAAC GTGCAAATAA CAGTAATAAG 
AGACTTTGTA TCCCAACGAT ACCAGAAGAA GATTTTGCCC AGGCGGTAAA GGCTATGGTA 
AAGATGGATG AAAGATGGAT ACCTACAAAG CCGGGCACTT CCCTTTATAT TCGTCCTTTT 
GTAATTGCAA CAGATCCATT CCTTGGGGTG CGTCCATCCA ATCGTTATCT TTTTGCTGTG 
ATTTTATCCC CAGTTGGTGC TTATTATCCA GAAGGATTAA ATCCTGTGAA GATTTGGATT 
GAGGATGAAT ATGTCAGAGC CATCAAAGGA GGAATCGGAG AAGCAAAAAC AGGTGGTAAC 
TATGTAGCGT CTTTGGCTTC TCAGGTAAAA GCTCATGAAG AAGGATATTC TCAGGTGTTA 
TGGTTAGACG GTAAGGAAAG AAAATATATC GAAGAAGTTG GTGCAATGAA TATTTTCTTT 
AAAATTAATG GTAAAGTGCT AACACCAGAG TTAAATGGTA GTATTTTACC AGGTGTAACC 
AGAGACTCCG TAATTTCGTT ATGCAAACAT TGGAACGTTC CAGTTGAGGA AAGAAGAATT 
TCCGTTGAAG AACTCTATGA AGCAGGTAAA GACGGTAGTT TAGAAGAAGT GTTTGGTACT 
GGAACTGCTG CAGTTATTTC ACCGGTGGGA CACCTTCGTT TTGAAGATCA TGTATTAATG 
GTTGGAGATG GTGGTATCGG AGAGTTTAGT CAAAAAATAT ATGATACGAT AACCGGTATC 
CAATTAGGGA AAGTCGAAGA TACTCTTGGG TGGACTGTGG AAGTAGTGTA A
 
Protein sequence
MLNIRYEKTT APKELPAADN PLKFGTIFTD HMFLMDYEEG KGWHDARIVP YGPISLEPSA 
MVFHYGQEMF EGLKAYKTED GRTLLFRPNK NAERANNSNK RLCIPTIPEE DFAQAVKAMV 
KMDERWIPTK PGTSLYIRPF VIATDPFLGV RPSNRYLFAV ILSPVGAYYP EGLNPVKIWI 
EDEYVRAIKG GIGEAKTGGN YVASLASQVK AHEEGYSQVL WLDGKERKYI EEVGAMNIFF 
KINGKVLTPE LNGSILPGVT RDSVISLCKH WNVPVEERRI SVEELYEAGK DGSLEEVFGT 
GTAAVISPVG HLRFEDHVLM VGDGGIGEFS QKIYDTITGI QLGKVEDTLG WTVEVV