| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0536 |
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| Symbol | |
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| ID | 5743450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 683808 |
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| End bp | 685622 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641291648 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001557662 |
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| Protein GI | 160878694 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000248515 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGATA ATAAAATACT GACAAGAGCA TATGTAGGAT GTGCTACCTT CGATAGTGAC
TTTCGTATCA GGGTAGGAGA TGAAGGCATC TATCGAATTA TAGATGAAGG AAAATGCTAT
CCTTATTCTC TTCTTCTGTT AATACATAAT GAGGAACAGG AAGACTTTTG CATCGCTGTT
CAGAATTTAA AGGAAAATGA AGTGCATAGT GGTACCTTTC ATATTCGTCT TGAGGATGGG
AAGTTCTATG TTGTGTATTA TGTCGTAGAA AATCAGGGGA TTCAATACAT GGACGAAGAG
TTATATCAAA TACGTCTATA TAATATAAAG GCATTTCATC AAGTAATAAC GAAACAAGAG
AATGAGATTA TGGATTATCG GACCATATTA AGTTTAACTA ATAATCTTTA TTTTTCTTAT
GATATGAATA CAACAAATTT TACATATTAT TGGATGAGTG GGAATCAAGA GGTAATAGTC
GCACAACAGC CTCTTCTTTT ATGGAAAAAA GAAGTATTAG ATAATGGTTA TGTAAAAGAG
CAGGAAAAAG CCATTTTCGG TAGTATGTGT GAAGATTTAA TGGCGGGAAC ATCGAACTTT
TATTACCAAC TTATCAATAG CATCTTAACA AATGGAAAAG AAGTAGTTCG TTGGGTTATT
CGAGGTTGCG CAGTTCATGA AAGAATGAAG TTGGATAGAA TTGTTGGTGT TATAGAAATT
GAGAAGTTAA CGAAGGATGT ACAAGAGAAT TTCTTTTATG ACCTAATGAA TCGGGATGCT
CTTACAGGCT TATTGAATAA GAGAGCTATA ACTCAGCTTG CTGAGCAAAA GATCCAATAT
ACTGGTAAGG ATAAGTTCCG CTTTTTAATC TTAGATGTTG ATAACTTTAA AACGATTAAT
GATTCCTATG GACATATGGT TGGTGATGAG GCTATCGTAA GAGTAGCCAA TATTGTAAAA
AAGATGGTTG GCGATCATGG GGTTGTTGGA AGAATAGGTG GAGATGAATT ATTTGCTATC
TTAGATAATG TGGACGATGA AAAGAGCCTA AGAAATGTAT TAAAGGCAAT ACGAGAAAAT
GTTGCTTATG CTTACGTTGG TTCTGAAAAC AATATCCATA TCACATGTTC CATGGGTTGT
GCAGAATATC CTACCGATGG GGTATCCTAT AAGGAACTTT TTCAGAAGGC AGACTATAGT
TTATACCTTG CTAAGGAAAA GGGGAAAAAC CGTTATATCA TCTATAATCC TTTAAAACAT
GGTGAAGTAA GTTGCAAGTT CCCGAATGCT ATCCTTGGAA TGGAGATAGC TTTTGCAGGA
TGTAGTAATA CGAATCTTTT TTCAAACATG ATGCAATCTT TATATGAAAT GCGTAAAGAT
GGAATAGAAG AGGTATTCTG TCAGTTAGGA GAATTATATC AGTTTGAAAA GATAAATGTT
TATTATGGAA GAGAATTGCC ATTGATTATT CAATGGGGGA AAATCAATTC GGAAGATAAG
AATGCAAAAT ATTTGTTAGA ACAAGGATAT CAGAAGAACT TTTCTGCAAA TGGTGTTATT
GTATTAGAAA ATATGAATAT CAGTAAATCG TTGCAGGCTT ATCAAATTTT TATGAAGCAA
AATTTAACAT TTGTTATGCA AATTATGATA AAAAAGGAAA ACAATATTTT GGGTTTAATC
TCCTTAGAAA GAAAGGTAAA AAAATCTAAG ATGTCAGTAG TTGATATTAA CAATTTAGAG
CTATTATGCC GCCTGATAGG AAATATAGTT CTAGATACAA CACCTGATAG AAATGTAATT
CTAGATACAA TTTAA
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| Protein sequence | MEDNKILTRA YVGCATFDSD FRIRVGDEGI YRIIDEGKCY PYSLLLLIHN EEQEDFCIAV
QNLKENEVHS GTFHIRLEDG KFYVVYYVVE NQGIQYMDEE LYQIRLYNIK AFHQVITKQE
NEIMDYRTIL SLTNNLYFSY DMNTTNFTYY WMSGNQEVIV AQQPLLLWKK EVLDNGYVKE
QEKAIFGSMC EDLMAGTSNF YYQLINSILT NGKEVVRWVI RGCAVHERMK LDRIVGVIEI
EKLTKDVQEN FFYDLMNRDA LTGLLNKRAI TQLAEQKIQY TGKDKFRFLI LDVDNFKTIN
DSYGHMVGDE AIVRVANIVK KMVGDHGVVG RIGGDELFAI LDNVDDEKSL RNVLKAIREN
VAYAYVGSEN NIHITCSMGC AEYPTDGVSY KELFQKADYS LYLAKEKGKN RYIIYNPLKH
GEVSCKFPNA ILGMEIAFAG CSNTNLFSNM MQSLYEMRKD GIEEVFCQLG ELYQFEKINV
YYGRELPLII QWGKINSEDK NAKYLLEQGY QKNFSANGVI VLENMNISKS LQAYQIFMKQ
NLTFVMQIMI KKENNILGLI SLERKVKKSK MSVVDINNLE LLCRLIGNIV LDTTPDRNVI
LDTI
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