Gene Cphy_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0520 
Symbol 
ID5743434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp660574 
End bp660999 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content37% 
IMG OID641291632 
Productbeta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 
Protein accessionYP_001557646 
Protein GI160878678 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00689323 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATTAA ATTGTAATGA AATTATGGAT ATAATTCCGC ACCGTAGTCC ATTTTTATTA 
GTAGACAGAA TCTTAGAATT AGTTCCAGGA ATTCGTGCTA TCGGAAGAAA GTGTGTAACT 
TTTAATGAGC CTTTTTTTAC TGGACATTAT CCAGGTAATC CAGTGATGCC AGGAGTCTTA 
ATTATAGAAG CATTAGCACA GGTAGGTTCC GTGGTTATGC TATCTTTGGA AGAAAATAAA 
GGTAAAGTTC CCTTCTTTGG GGGAATTGAT AAAGCGAAAT TTCGTAACAT GGTAACACCT 
GGTGATGTGT TAACATTAGA GGTTTCTTTA CTAAAGCAAA AAGGACCAGT CGGTGTAGCT 
ACCGCAAAAG CATACGATGA CGAAAAGGTT TTTGCAGAGG CAGAATTAAC GTTTGTAATA 
CGTTAA
 
Protein sequence
MVLNCNEIMD IIPHRSPFLL VDRILELVPG IRAIGRKCVT FNEPFFTGHY PGNPVMPGVL 
IIEALAQVGS VVMLSLEENK GKVPFFGGID KAKFRNMVTP GDVLTLEVSL LKQKGPVGVA 
TAKAYDDEKV FAEAELTFVI R