Gene Cphy_0518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0518 
Symbol 
ID5743432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp658744 
End bp659979 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content40% 
IMG OID641291630 
Product3-oxoacyl-(acyl-carrier-protein) synthase 2 
Protein accessionYP_001557644 
Protein GI160878676 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.443334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAG TAGTAGTAAC AGGTATGGGA GTAATTACTC CAATCGGAAA GAATGTGGAA 
GATTTTTGGA GTAATATTAA AAGTGGAACA ACAGGTTTTG GGCCGATTAC CTATTTTGAT
ACAACCGATT ATCGTGCAAA GCTTGCAGCA GAGGTAAAAG ATTTTAATGC AGCCGACTAT
ATGGATGGGA AGTCAGCAAG ACGTATGGAA AAATTCTGTC AATATGCAGT AGCTGCGACA
AAGGAAGCGA TCGAATCCAG TGGTCTTGAT TTAACGAAAG AAGATAGAAC AAGAATTGGT
GTGTCTGTTG GTTCTGGTAT TGGTGACTTA GTGATTATCG AAAAGGAATA CGAAAAAGTT
TTAAATAACG GTCCTAAGAG AACCAACCCA TTATTTGTTC CGCTGATGAT AAGCAATATG
GCAGCTGGTA ATGTATCAAT TAATTTCGGA CTAAAGGGAA AATGTATTAA CGTAGTAACT
GCATGTGCGA CAGGAACACA TTCGATTGGA GAAGCGTACC GTGCAATTCA ATGTGGTGAT
GCAGATGTTA TGGTTTGTGG TGGCACGGAA GCAGCGATTT CAAAGCTTGG TATTGCAGGA
TTTGGAGCAC TTACTGCATT AAGTTCATCG GAAGATCCAA AGAGAGCCTC CATTCCTTTT
GATAAAGAAC GTAACGGCTT TATTATGGGA GAGGGTGCTG GTGTTGTTGT GATTGAGTCC
TTAGAACATG CCAAAGCAAG AGGAGCGAAT ATCTTAGCAG AAGTAGCTGG ATATGGAGCA
ACAGCAGATG CTTTTCATAT TACCTCACCT GCTGAAGATG GAGAAGGTGC GATGAGAGCA
ATGCTCCTTG CAGTGAAAGA AGCAGGCTTA AAACCAGAAG ATGTTGATTA CATCAATGCA
CACGGAACAA GTACTCATCA CAATGATTTA TTTGAGACAA AATCGATTAA AGCTGCATTT
GGAGAGCATG CATATCATCT TAATGTGAAT TCTACAAAGT CAATGACAGG TCATCTGTTA
GGTGCTGCTG GCGCTGTTGA ATTTATTGTA TGTGTGAAAT CTGTACAGGA AGATTTTATT
CATGCGACAG TTGGTTATAG CGTACCAGAT GAAGAACTTG ATTTGGATTA TACAAAGGAA
GCTAGAACGG ACAAAAAGGT AAATGTAGCA ATTAGTAATT CTCTAGGATT TGGTGGACAC
AATGGAACTC TTCTAGTAAA AAAATATGTA GAGTAA
 
Protein sequence
MKRVVVTGMG VITPIGKNVE DFWSNIKSGT TGFGPITYFD TTDYRAKLAA EVKDFNAADY 
MDGKSARRME KFCQYAVAAT KEAIESSGLD LTKEDRTRIG VSVGSGIGDL VIIEKEYEKV
LNNGPKRTNP LFVPLMISNM AAGNVSINFG LKGKCINVVT ACATGTHSIG EAYRAIQCGD
ADVMVCGGTE AAISKLGIAG FGALTALSSS EDPKRASIPF DKERNGFIMG EGAGVVVIES
LEHAKARGAN ILAEVAGYGA TADAFHITSP AEDGEGAMRA MLLAVKEAGL KPEDVDYINA
HGTSTHHNDL FETKSIKAAF GEHAYHLNVN STKSMTGHLL GAAGAVEFIV CVKSVQEDFI
HATVGYSVPD EELDLDYTKE ARTDKKVNVA ISNSLGFGGH NGTLLVKKYV E